| krandtest {ade4} | R Documentation |
Plot and print many permutation tests. Objects of class 'krandtest' are lists.
## S3 method for class 'krandtest' plot(x, mfrow = NULL, nclass = NULL, main.title = x$names, ...) ## S3 method for class 'krandtest' print(x, ...) as.krandtest(sim, obs, alter = "greater", call = match.call(), names = colnames(sim), p.adjust.method = "none")
x |
: an object of class |
mfrow |
: a vector of the form 'c(nr,nc)', otherwise computed by as special own function |
nclass |
: a number of intervals for the histogram |
main.title |
: a string of character for the main title |
... |
: further arguments passed to or from other methods |
sim |
a matrix or data.frame of simulated values (repetitions as rows, number of tests as columns |
obs |
a numeric vector of observed values for each test |
alter |
a vector of character specifying the alternative hypothesis for each test. Each element must be one of "greater" (default), "less" or "two-sided". The length must be equal to the length of the vector obs, values are recycled if shorter. |
call |
a call order |
names |
a vector of names for tests |
p.adjust.method |
a string indicating a method for multiple
adjustment, see |
plot.krandtest draws the p simulated values histograms and the position of the observed value.
Daniel Chessel and Stephane Dray stephane.dray@univ-lyon1.fr
wkrandtest <- as.krandtest(obs=c(0,1.2,2.4,3.4,5.4,20.4),sim=matrix(rnorm(6*200),200,6)) wkrandtest plot(wkrandtest)