a3b35faf3ceeef91c33c24e59928f9fb *DESCRIPTION
3593f0aaf8aef2b5eb7fd90010b25494 *NAMESPACE
c44a76349594ace62702f5859d959567 *R/Binary_Etc.R
a6fe180df2cc48fb56065100f36c9777 *R/Binary_Function.R
8470a09f109264da7e6d77d4c8b89f97 *R/Binary_Function1.R
46d59c75e47911848148fb769cf88845 *R/Binary_MAIN.R
cf4fbd6fed0aa53d3a4abe2c867bc190 *R/Binary_MAIN_ExactBin.R
f103ff1a1e5a55a1536708cbc7ac58c6 *R/Binary_MAIN_Robust.R
008c4ccc265d8ea342587f41b8d984ea *R/Binary_Result_Calibration.R
3bf018e03e14b45f76e36f74eac2b5c7 *R/Binary_single.b.firth.R
cb3f87868e1aa64d25381ae64a75ba0c *R/Function.R
78b71d4b014c443ea97e35c4184bb814 *R/Function_Power_Resampling.R
443d6d167da2984a51bd54e4428d98ba *R/Joint_CommonRare.R
423a535232115ebd220a631365dbdb8b *R/Joint_CommonRare_Robust.R
a270d1f8802d88edb99d9e9ed343d164 *R/Kernel.R
d8c0030a3c8789c3d8f8da20e25c3058 *R/MAIN.R
9d71e777940a97b4215101cef8beac5a *R/MK_SSD_All_Output.R
e2b6418eb86c6a367df4cb08ae00da35 *R/Main_SSD.R
99d3d304000ec9fd1ce2f5637964add6 *R/Null_Model.R
9e511cede46a7537cffef953dd302247 *R/Power.R
d2e084f5648696600b31e629ffe01786 *R/Power_Corr.R
192e270bf689a25409a2b16e5aaaab5e *R/SKAT_CompQuadForm.R
bbf7febd6ada854801c324b3c5f0aab9 *R/SKAT_EMMAX.R
b8e225ab48b0abae9c9f67685769119d *R/SKAT_Linear.R
5c76d824d44162e8618687954d165dea *R/SKAT_Logistic.R
685103f5ecbcfa54f9e9269efff9081a *R/SKAT_Logistic_VarMatching.R
7dfb0e2dbd7b2cb2dca3420beb596ec1 *R/SKAT_Meta_Optimal.R
070ecc7ef9adde5c5c9b697f43d5fc2a *R/SKAT_Optimal.R
d2cf0df47e14ac6e21f3edbcda41b928 *R/SKAT_Optimal_VarMatching.R
dde08031c874c94007bc84909c2b6b1b *R/SSD.R
33b6f074d28879da59108d92a0c86c14 *R/Sparse.R
4ef48983a8262bfb662bb7f6179b3999 *R/X_Chrom.R
38985a2582fd6566586a3b1175bfc2ef *build/vignette.rds
c4fe1107eb15521fa3fed0ffdb3a77b1 *data/SKAT.example.ChrX.rda
76e055dd63111923dd47b2a80855063b *data/SKAT.example.rda
b9e2ebf0f5b7a8ef8de0f5ef8ccf034f *data/SKAT.fam.example.rda
e7d50081063a80c7b465d69f8cbccf2b *data/SKAT.haplotypes.rda
f1002b4e0f50d768e00f08ff567105c5 *data/SKATBinary.example.rda
6daf2405b55d75521ac6cdbfd13f441d *data/datalist
3ac9562fde3940fd94221571e22b246d *inst/doc/SKAT.R
08fef54f3853bc9c481e7c32111420db *inst/doc/SKAT.Rnw
2de6b8335bfbee1a8f7388a8364b1c71 *inst/doc/SKAT.pdf
70bfc72058b01b3dca52f5e99eec5b04 *man/Close_SSD.rd
4f24d4ddd05f88a294a14f0a0d662ec7 *man/Generate_SSD_SetID.rd
30336c24e6f274be4e7392a7a015eaec *man/Get_ENT.rd
1e33d0cdcef965d20f7a76c7482badcf *man/Get_Genotypes_SSD.rd
cf82cd198bb86d2e90a98976f59df03e *man/Get_Logistic_Weights.rd
c49943a248ac7b40a4f0050df487b712 *man/Get_RequiredSampleSize.rd
2c7a5820a776c962ecc8e0e672217ad7 *man/Get_Resampling_Pvalue.rd
0c2835bd15a3e41e00ed79491cb58ce4 *man/Open_SSD.rd
4575dde911ac5ee425208945e674608c *man/Power_Continuous.rd
9c9af4abe8dc63f067421752beac4eb9 *man/Power_Logistic.rd
33ef518f1fef87e562b02c6414f47d87 *man/QQPlot_Adj.rd
5a727c93cfae303b872f5e7a0675e3e1 *man/Read_Plink_FAM.rd
f4fa1ff0c4e8e320821c8e82a1bddb04 *man/Read_SNP_WeightFile.rd
f7325c49856fc9afc5b30581ff993c6b *man/Resampling_FWER.rd
d032334b3e4f1200733dff652a7baa10 *man/SKAT.SSD.All.rd
523502b481b8e5d1a89df192f080fcb5 *man/SKAT.example.ChrX.rd
8d815f91cd850341802b9ecc334a1569 *man/SKAT.example.rd
4c665d009528437a28381f4d2c208c53 *man/SKAT.fam.example.rd
9d453b59b6c82076ca126baf7f6da767 *man/SKAT.haplotypes.rd
bf8830aa7bc8b775634cfbb361b6e807 *man/SKAT.rd
3e7305ff691a66f8422af861e4489f69 *man/SKATBinary.example.rd
4cce1abb7b1cb557ae2360f40d25d94e *man/SKATBinary.rd
e537f4314c997a9a3d463c7f39574de5 *man/SKATBinary_Robust.rd
af2380a722e1c232e2f8bf8c83e90b99 *man/SKATBinary_Single.rd
aa0bb1a9278c916051b99abb844ad216 *man/SKAT_ChrX.rd
39cf55807b3638c3db8ce50cf27211e6 *man/SKAT_CommonRare.rd
9baefaa9035fc40eff156d9ed40ba946 *man/SKAT_CommonRare_Robust.rd
16b94f8f54434fc0d28fc9dc4efec1b3 *man/SKAT_NULL_emmaX.rd
4d408a15d4dc17f61fe68dbfdc33df4d *man/SKAT_Null_Model.rd
4674b42a9e9732ee885cb6b8a284db59 *man/SKAT_Null_Model_MomentAdjust.rd
1d3d2e7c088f991851582a40a1f08e56 *man/SSD_FILE_OPEN.rd
307bc698e7079d768fc29c97d3198bd6 *src/Binary_ComputeExact.cpp
2f306d4e2de7689eda64ff32c6271d29 *src/Binary_ComputeExact.h
6ca76298f37626f57caba81818115c1a *src/Binary_ComputeExactMC.cpp
f976022a03e69e6509e04ceea494a5a3 *src/Binary_ComputeExactMC.h
ddf907473f0e90a91c43f404f13040e0 *src/Binary_ComputeExactSKATO.cpp
2436f8b82a67f0fd90ab44211b470188 *src/Binary_HyperGeo.cpp
6c43997ba2c7b07b7b91bc571c14e687 *src/Binary_HyperGeo.h
a815f9bd5aca02a2540754d019b99c23 *src/Binary_Permu_SKAT.cpp
381085bdcd6c68edc569947ed7c0d914 *src/Binary_Permu_SKAT.h
34d0a02509ff78199834c7d96e7944dc *src/Binary_global.cpp
23a18e9e64f6f1f8a650636bc50f115a *src/Binary_global.h
8017677214e4d72d3513e087cf0f21e6 *src/Binary_resampling.cpp
c026767413f7c44c9eb102f2b06adc6f *src/DArray.h
eff07e87bdbbbb8fa621f68f976d187f *src/NPsort.h
5768b036e06f795827a519be216b060f *src/bed_reader.cpp
db13b2bf907bfb45123a4b30a72eea5f *src/bed_reader.h
68284e1647c9edf4f795d641664cbbba *src/error_messages.h
53dfed95fb2a45cfd45d5382d679ab66 *src/interface_new.cpp
83169d99151d9e9671f9d75309e2097d *src/interface_to_R.cpp
be3032949397db9890337f219e1a2f72 *src/interface_to_R.h
5e5ab8a6183c058e4ecdf8a0dbb63155 *src/kernel_func.cpp
c514fd6717a844859a865b4b6db230ce *src/mwo_reader.cpp
63027286332242701d87f09650599103 *src/mwo_reader.h
dd3d814ef398b50510fd12d79494b8c6 *src/qfc.cpp
b172f613af381af31aa20912270fa94c *src/setid_bim_index.cpp
31e546b9ddf57b3bbae190c1223741dd *src/setid_bim_index.h
3bb2928bbc87998c9083bed508f75c1d *vignettes/Example.zip
cff473f152929cc171a7235ce40dac8c *vignettes/Example1.Cov
ba60f2917612cca53407a1933d988f39 *vignettes/Example1.SetID
58f150ca5ebc97ec648976ebdec87802 *vignettes/Example1.bed
e3b99ed0a36686c879c840e293e7687d *vignettes/Example1.bim
6e703716b569c14804f785d0cc8160dd *vignettes/Example1.fam
a4fe8d43443b9b642487766e6a00edb1 *vignettes/Example1_NoHeader.Cov
254951838363388801b833770db0d905 *vignettes/Example1_Ord.Cov
712467feaf10611efb83979a19542d68 *vignettes/Example1_Weight.txt
9a8d91e7b3c8d88b3d465b2c5ee5e614 *vignettes/Example1_old.fam
08fef54f3853bc9c481e7c32111420db *vignettes/SKAT.Rnw
aed3b04aca9252ca2304426184f124ad *vignettes/SKATBinary.example.SetID
8bc37f067620cb3e10ad29809ec1ae4b *vignettes/SKATBinary.example.bed
6dd7c3002b63f683e32131e75b2d4cb8 *vignettes/SKATBinary.example.bim
0743a801b4c9bb8271d99a45db2cf73d *vignettes/SKATBinary.example.cov
d9afb3be7eb8352c2117f6f2d2c5ad33 *vignettes/SKATBinary.example.fam
