RcppPlanc: Parallel Low-Rank Approximation with Nonnegativity Constraints
'Rcpp' bindings for 'PLANC', a highly parallel and extensible NMF/NTF (Non-negative Matrix/Tensor Factorization) library. Wraps algorithms described in Kannan et. al (2018) <doi:10.1109/TKDE.2017.2767592> and Eswar et. al (2021) <doi:10.1145/3432185>. Implements algorithms described in Welch et al. (2019) <doi:10.1016/j.cell.2019.05.006>, Gao et al. (2021) <doi:10.1038/s41587-021-00867-x>, and Kriebel & Welch (2022) <doi:10.1038/s41467-022-28431-4>.
| Version: | 2.0.13 |
| Depends: | R (≥ 3.5) |
| Imports: | methods, Rcpp, Matrix, hdf5r.Extra |
| LinkingTo: | Rcpp, RcppArmadillo, RcppProgress, HighFive |
| Suggests: | knitr, withr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2025-07-14 |
| DOI: | 10.32614/CRAN.package.RcppPlanc |
| Author: | Andrew Robbins 
[aut, cre],
Yichen Wang [aut],
Joshua Welch
[cph],
Ramakrishnan Kannan
[cph],
Conrad Sanderson
[cph],
Blue Brain Project/EPFL [cph] (HighFive Headers),
UT-Batelle [cph] (The original PLANC code) |
| Maintainer: | Andrew Robbins <robbiand at umich.edu> |
| BugReports: | https://github.com/welch-lab/RcppPlanc/issues/ |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| Copyright: | see file COPYRIGHTS |
| URL: | https://github.com/welch-lab/RcppPlanc/ |
| NeedsCompilation: | yes |
| SystemRequirements: | C++17, cmake >= 3.21.0, hdf5, git, patch, gnumake, hwloc, GNU make |
| Materials: | README, NEWS |
| CRAN checks: | RcppPlanc results [issues need fixing before 2026-03-08] |
Documentation:
| Reference manual: | RcppPlanc.html , RcppPlanc.pdf |
| Vignettes: |
RcppPlanc, Fast NMF and iNMF Implementation with C++ (source, R code) |
Downloads:
| Package source: | RcppPlanc_2.0.13.tar.gz |
| Windows binaries: | r-devel: RcppPlanc_2.0.13.zip, r-release: RcppPlanc_2.0.13.zip, r-oldrel: RcppPlanc_2.0.13.zip |
| macOS binaries: | r-release (arm64): RcppPlanc_2.0.13.tgz, r-oldrel (arm64): RcppPlanc_2.0.13.tgz, r-release (x86_64): RcppPlanc_2.0.13.tgz, r-oldrel (x86_64): RcppPlanc_2.0.13.tgz |
| Old sources: | RcppPlanc archive |
Reverse dependencies:
| Reverse imports: | rliger |
Linking:
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