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acnuc_uniprot_local: Updates Cycles

bank: acnuc_uniprot_local

Release

Release 2015_08
BankSize 204,781G
Downloaded files size 27,191G
Elapsed time 08:01:13
Online Directory /panbanques/biomaj/databases/acnuc/uniprot_local/acnuc_uniprot_local_2015_08

Sessions infos

Start End Elapsed Time Nb Files Status
10-09-2015 09:35:04 10-09-2015 10:45:08 00:01:10 download=1/ Extract=0/ Local=0 Update Cycle crashed
warning
Offline directory does not exist, Biomaj will create it. (value:/banques/biomaj/databases/acnuc/uniprot_local_tmp)
warning
Production directory does not exist, Biomaj will create it. (value:/banques/biomaj/databases/acnuc/uniprot_local)
warning
file [/banques/biomaj/databases/acnuc/uniprot_local_tmp/uniprot_sprot.dat] matches with [] (from property :local.files.excluded)
warning
file [/banques/biomaj/databases/acnuc/uniprot_local_tmp/uniprot_sprot.dat] is excluding from the extract list.
warning
file [/banques/biomaj/databases/acnuc/uniprot_local_tmp/uniprot_trembl.dat] matches with [] (from property :local.files.excluded)
warning
file [/banques/biomaj/databases/acnuc/uniprot_local_tmp/uniprot_trembl.dat] is excluding from the extract list.
error
** Biomaj stopped. ** Please consult the logs [/banques/biomaj/biomaj-1.0//log/acnuc_uniprot_local/20150910093503/mirror.log] to obtain more information.
10-09-2015 13:05:53 10-09-2015 13:05:55 00:00:00 download=0/ Extract=0/ Local=0 Update Cycle crashed
error
** Biomaj stopped. ** Please consult the logs [/banques/biomaj/biomaj-1.0//log/acnuc_uniprot_local/20150910130552/mirror.log] to obtain more information.
10-09-2015 13:06:45 12-09-2015 16:38:39 02:03:31 download=0/ Extract=0/ Local=0 Update Cycle crashed
error
** Biomaj stopped. ** Please consult the logs [/banques/biomaj/biomaj-1.0//log/acnuc_uniprot_local/20150910130645/mirror.log] to obtain more information.
14-09-2015 09:36:07 14-09-2015 21:02:43 00:11:26 download=0/ Extract=0/ Local=0 Update Cycle crashed
error
** Biomaj stopped. ** Please consult the logs [/banques/biomaj/biomaj-1.0//log/acnuc_uniprot_local/20150914093606/mirror.log] to obtain more information.
15-09-2015 10:10:05 00:00:00 download=0/ Extract=0/ Local=0 Update Cycle crashed
warning
Executable time [old:10-09-2015 13:06:38] [new:14-09-2015 10:53:19]
warning
exec process [/banques/biomaj/biomaj-1.0/conf/process/build_acnuc_local_swiss.csh] has been modified.
15-09-2015 10:13:56 17-09-2015 17:38:42 02:07:24 download=0/ Extract=0/ Local=0 Update Cycle crashed
error
** Biomaj stopped. ** Please consult the logs [/banques/biomaj/biomaj-1.0//log/acnuc_uniprot_local/20150915101355/mirror.log] to obtain more information.
18-09-2015 10:42:00 18-09-2015 10:42:27 00:00:00 download=0/ Extract=0/ Local=0 Update Cycle crashed
warning
--Can't Send a mail:Unknown SMTP host: smtp.univ-lyon1.fr
error
** Biomaj stopped. ** Please consult the logs [/banques/biomaj/biomaj-1.0//log/acnuc_uniprot_local/20150918104159/mirror.log] to obtain more information.
18-09-2015 10:43:36 18-09-2015 10:44:04 00:00:00 download=0/ Extract=0/ Local=0 Update Cycle crashed
warning
--Can't Send a mail:Unknown SMTP host: smtp.univ-lyon1.fr
error
** Biomaj stopped. ** Please consult the logs [/banques/biomaj/biomaj-1.0//log/acnuc_uniprot_local/20150918104335/mirror.log] to obtain more information.
18-09-2015 10:44:59 18-09-2015 10:48:31 00:00:03 download=0/ Extract=0/ Local=0 Update Cycle Completed
warning
--Can't Send a mail:Unknown SMTP host: smtp.univ-lyon1.fr

(Local => files from preview release)

METAPROCESS :


Session:10-09-2015 09:35:04

Meta Process : PRE1 (duration : 00:00:00)

Session:10-09-2015 09:35:04

Meta Process : POST1 (duration : 00:00:00)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 00:00:00 Process crashed
Errors
I/O error, message:Cannot run program "/banques/biomaj/biomaj-1.0/conf/process/build_acnuc_local_swiss.csh" (in directory "/banques/biomaj/databases/acnuc/uniprot_local/future_release"): error=13, Permission non accordée

Session:10-09-2015 13:05:53

Meta Process : POST1 (duration : 00:00:00)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 00:00:00 Process crashed
Errors
rm: impossible de supprimer « /data/penel/biomaj/ »: Aucun fichier ou dossier de ce type
"Process indexacnuc (with executable indexacnuc.exe) generate an error."

Session:10-09-2015 13:06:45

Meta Process : POST1 (duration : 00:00:00)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 02:03:31 Process completed
PP Name description cmd Elabs. Time Status
blastacnuc Blast database generation blast_acnuc_uniprot.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 00:00:00 Process crashed
Errors
grep: /banques/biomaj/databases/acnuc/uniprot_local/future_release/index/HELP: Aucun fichier ou dossier de ce type
"Process blastacnuc (with executable blastacnuc.exe) generate an error."

Session:14-09-2015 09:36:07

Meta Process : POST1 (duration : 00:11:26)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 02:03:31 Process completed
PP Name description cmd Elabs. Time Status
blastacnuc Blast database generation blast_acnuc_uniprot.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 00:11:26 Process crashed
Errors
BLASTDB: Undefined variable.
"Process blastacnuc (with executable blastacnuc.exe) generate an error."

Session:15-09-2015 10:10:05

Meta Process : POST1 (duration : 00:00:00)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 00:00:00 Process completed

Session:15-09-2015 10:13:56

Meta Process : POST1 (duration : 02:07:24)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 02:07:24 Process crashed
Errors
workddir: Undefined variable.
"Process indexacnuc (with executable indexacnuc.exe) generate an error."

Session:18-09-2015 10:42:00

Meta Process : POST1 (duration : 00:00:00)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 00:00:00 Process crashed
Errors
Error opening file /banques/biomaj/databases/acnuc/uniprot_local/future_release/index/SMJYT: No such file or directory
"Process indexacnuc (with executable indexacnuc.exe) generate an error."

Session:18-09-2015 10:43:36

Meta Process : POST1 (duration : 00:00:00)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 00:00:00 Process crashed
Errors
files: Undefined variable.
"Process indexacnuc (with executable indexacnuc.exe) generate an error."

Session:18-09-2015 10:44:59

Meta Process : POST1 (duration : 00:00:00)
PP Name description cmd Elabs. Time Status
indexacnuc Acnuc index generation build_acnuc_local_swiss.csh /banques/biomaj/databases/acnuc/uniprot_local/future_release El.Time.: 00:00:03 Process completed
Errors
cp : voulez-vous écraser « ./HELP » ? cp : voulez-vous écraser « ./HELP_WIN » ? cp : voulez-vous écraser « /banques/biomaj/databases/acnuc/uniprot_local/future_release/build_acnuc_sp.uniprot_sprot.log » ? cp : voulez-vous écraser « /banques/biomaj/databases/acnuc/uniprot_local/future_release/build_acnuc_sp.uniprot_trembl.log » ?
PP Name description cmd Elabs. Time Status
sendMail mail sendMailTLSE.pl -s '[Refseq - db.name remote.release] End Post Process' -m 'local.time' El.Time.: 00:00:00 Process completed