bpp-popgen  3.0.0
bpp::PolymorphismSequenceContainer Member List

This is the complete list of members for bpp::PolymorphismSequenceContainer, including all inherited members.

AbstractSequenceContainer(const Alphabet *alpha)bpp::AbstractSequenceContainer
AbstractSequenceContainer(const AbstractSequenceContainer &sc)bpp::AbstractSequenceContainer
AbstractSequenceContainer(const SequenceContainer &sc)bpp::AbstractSequenceContainer
AbstractValuesContainer(const Alphabet *alpha)bpp::AbstractValuesContainer
AbstractValuesContainer(const Comments &comments, const Alphabet *alpha)bpp::AbstractValuesContainer
AbstractValuesContainer(const AbstractValuesContainer &sc)bpp::AbstractValuesContainer
addObject(std::shared_ptr< Site > object, size_t objectIndex, bool checkPosition=false)bpp::VectorSiteContainer
addObject(std::shared_ptr< T > object, size_t objectIndex, bool checkPosition=false)bpp::VectorSiteContainervirtual
addObject(std::shared_ptr< Sequence > object, size_t objectIndex, const std::string &name, bool check=false)bpp::VectorSiteContainer
addObject(std::shared_ptr< T > object, size_t objectIndex, const std::string &name, bool check=false)=0bpp::VectorSiteContainerpure virtual
addObject(std::shared_ptr< T > object, const std::string &name, bool checkName=false)bpp::VectorSiteContainervirtual
addObject(std::shared_ptr< T > object, const std::string &name, bool checkName=false)bpp::VectorSiteContainervirtual
addObject(std::shared_ptr< T > object, size_t objectIndex, bool checkPosition=false)bpp::VectorSiteContainervirtual
VectorPositionedContainer< Site >::addObject(std::shared_ptr< Site > object, size_t objectIndex, bool checkPosition=false)VectorPositionedContainer< Site >
VectorMappedContainer< Sequence >::addObject(std::shared_ptr< Sequence > object, size_t objectIndex, const std::string &name, bool check=false)VectorMappedContainer< Sequence >
addObject_(std::shared_ptr< Site > object, size_t objectIndex, bool checkPosition=false) constbpp::VectorSiteContainerprotected
addObject_(std::shared_ptr< Sequence > object, size_t objectIndex, const std::string &name, bool check=false) constbpp::VectorSiteContainerprotected
addObject_(std::shared_ptr< T > object, const std::string &name, bool checkName=false) constbpp::VectorSiteContainerprotected
addObject_(std::shared_ptr< T > object, size_t objectIndex, bool checkPosition=false) constbpp::VectorSiteContainerprotected
VectorPositionedContainer< Site >::addObject_(std::shared_ptr< Site > object, size_t objectIndex, bool checkPosition=false) constVectorPositionedContainer< Site >protected
VectorMappedContainer< Sequence >::addObject_(std::shared_ptr< Sequence > object, size_t objectIndex, const std::string &name, bool check=false) constVectorMappedContainer< Sequence >protected
addSequence(const Sequence &sequence, bool checkName=true)bpp::PolymorphismSequenceContainerinlinevirtual
addSequence(const Sequence &sequence, size_t sequenceIndex, bool checkName=true)bpp::PolymorphismSequenceContainerinline
addSequenceWithFrequency(const Sequence &sequence, unsigned int frequency, bool checkName=true)bpp::PolymorphismSequenceContainer
addSequenceWithFrequency(const Sequence &sequence, size_t sequenceIndex, unsigned int frequency, bool checkName=true)bpp::PolymorphismSequenceContainer
addSite(const Site &site, bool checkPosition=true)bpp::VectorSiteContainervirtual
addSite(const Site &site, int position, bool checkPosition=true)bpp::VectorSiteContainervirtual
addSite(const Site &site, size_t siteIndex, bool checkPosition=true)bpp::VectorSiteContainervirtual
addSite(const Site &site, size_t siteIndex, int position, bool checkPosition=true)bpp::VectorSiteContainervirtual
addSite(const Site &site, bool checkPosition=true)bpp::VectorSiteContainervirtual
addSite(const Site &site, int position, bool checkPosition=true)bpp::VectorSiteContainervirtual
addSite(const Site &site, size_t siteIndex, bool checkPosition=true)bpp::VectorSiteContainervirtual
addSite(const Site &site, size_t siteIndex, int position, bool checkPosition=true)bpp::VectorSiteContainervirtual
AlignedValuesContainer()bpp::AlignedValuesContainer
alphabet_bpp::VectorSiteContainerprotected
appendObject(std::shared_ptr< Site > object)bpp::VectorSiteContainer
appendObject(std::shared_ptr< T > object)bpp::VectorSiteContainervirtual
appendObject(std::shared_ptr< Sequence > object, const std::string &name, bool check=true)bpp::VectorSiteContainer
appendObject(std::shared_ptr< T > object)bpp::VectorSiteContainervirtual
VectorPositionedContainer< Site >::appendObject(std::shared_ptr< Site > object)VectorPositionedContainer< Site >
VectorMappedContainer< Sequence >::appendObject(std::shared_ptr< Sequence > object, const std::string &name, bool check=true)VectorMappedContainer< Sequence >
changeName(const std::string &okey, const std::string &nkey)bpp::VectorSiteContainer
clear()bpp::PolymorphismSequenceContainervirtual
clearComments()bpp::VectorSiteContainer
clone() constbpp::PolymorphismSequenceContainerinlinevirtual
Commentable()bpp::Commentable
Commentable(const Comments &comments)bpp::Commentable
Commentable(const Commentable &com)bpp::Commentable
comments_bpp::VectorSiteContainerprotected
count_bpp::PolymorphismSequenceContainerprivate
createEmptyContainer() constbpp::VectorSiteContainervirtual
createEmptyContainer() constbpp::VectorSiteContainervirtual
decrementSequenceCount(size_t index)bpp::PolymorphismSequenceContainer
decrementSequenceCount(const std::string &name)bpp::PolymorphismSequenceContainer
deleteGeneralComments()=0bpp::VectorSiteContainerpure virtual
deleteGeneralComments()bpp::VectorSiteContainervirtual
deleteGeneralComments()bpp::VectorSiteContainervirtual
deleteObject(size_t objectIndex)bpp::VectorSiteContainer
deleteObject(const std::string &name)bpp::VectorSiteContainervirtual
deleteObject(size_t objectIndex)bpp::VectorSiteContainer
deleteObjects(size_t objectIndex, size_t length)bpp::VectorSiteContainer
deleteObjects(size_t objectIndex, size_t length)bpp::VectorSiteContainer
deleteSequence(size_t index)bpp::PolymorphismSequenceContainer
deleteSequence(const std::string &name)bpp::PolymorphismSequenceContainer
deleteSite(size_t siteIndex)bpp::VectorSiteContainervirtual
deleteSite(size_t siteIndex)bpp::VectorSiteContainervirtual
deleteSites(size_t siteIndex, size_t length)bpp::VectorSiteContainervirtual
deleteSites(size_t siteIndex, size_t length)bpp::VectorSiteContainervirtual
getAllGroupsIds() constbpp::PolymorphismSequenceContainer
getAlphabet() const=0bpp::VectorSiteContainerpure virtual
getAlphabet() constbpp::VectorSiteContainervirtual
getAlphabet() constbpp::VectorSiteContainervirtual
getComments(const std::string &name) constbpp::VectorSiteContainervirtual
getComments() constbpp::VectorSiteContainer
getComments(size_t sequenceIndex) constbpp::VectorSiteContainervirtual
getComments(size_t sequenceIndex) const =0bpp::VectorSiteContainervirtual
getComments(size_t sequenceIndex) constbpp::VectorSiteContainervirtual
getComments(size_t sequenceIndex) const =0bpp::VectorSiteContainervirtual
getGeneralComments() const=0bpp::VectorSiteContainerpure virtual
getGeneralComments() constbpp::VectorSiteContainervirtual
getGeneralComments() constbpp::VectorSiteContainervirtual
getGroupId(size_t index) constbpp::PolymorphismSequenceContainer
getGroupId(const std::string &name) constbpp::PolymorphismSequenceContainer
getName(size_t sequenceIndex) constbpp::VectorSiteContainervirtual
getName(size_t sequenceIndex) constbpp::VectorSiteContainervirtual
getNumberOfGroups() constbpp::PolymorphismSequenceContainer
getNumberOfObjects() constbpp::VectorSiteContainer
getNumberOfSequences() constbpp::VectorSiteContainervirtual
getNumberOfSequences() constbpp::VectorSiteContainervirtual
getNumberOfSites() constbpp::VectorSiteContainervirtual
getNumberOfSites() constbpp::VectorSiteContainervirtual
getObject(size_t objectIndex) constbpp::VectorSiteContainervirtual
getObject(size_t objectIndex)bpp::VectorSiteContainervirtual
getObject(size_t objectIndex) constbpp::VectorSiteContainervirtual
getObject(size_t objectIndex)bpp::VectorSiteContainervirtual
getObject(const std::string &name) constbpp::VectorSiteContainervirtual
getObject(const std::string &name)bpp::VectorSiteContainervirtual
getObject_(size_t objectIndex) constbpp::VectorSiteContainerprotected
getObject_(size_t objectIndex) constbpp::VectorSiteContainerprotected
getObjectName(size_t objectIndex) constbpp::VectorSiteContainervirtual
getObjectPosition(const std::string &name) constbpp::VectorSiteContainervirtual
getObjectsNames() constbpp::VectorSiteContainervirtual
getSequence(size_t sequenceIndex) constbpp::VectorSiteContainervirtual
getSequence(const std::string &name) constbpp::VectorSiteContainervirtual
getSequence(size_t sequenceIndex) constbpp::VectorSiteContainervirtual
getSequence(const std::string &name) constbpp::VectorSiteContainervirtual
getSequenceCount(size_t index) constbpp::PolymorphismSequenceContainer
getSequenceCount(const std::string &name) constbpp::PolymorphismSequenceContainer
getSequencePosition(const std::string &name) constbpp::VectorSiteContainervirtual
getSequencePosition(const std::string &name) constbpp::VectorSiteContainervirtual
getSequencesNames() constbpp::VectorSiteContainervirtual
getSequencesNames() constbpp::VectorSiteContainervirtual
getSite(size_t siteIndex) constbpp::VectorSiteContainervirtual
getSite(size_t siteIndex)bpp::VectorSiteContainervirtual
getSite(size_t siteIndex) constbpp::VectorSiteContainervirtual
getSite(size_t siteIndex)bpp::VectorSiteContainervirtual
getSitePositions() constbpp::VectorSiteContainervirtual
getSitePositions() constbpp::VectorSiteContainervirtual
getSize() constbpp::VectorSiteContainervirtual
getSize() constbpp::VectorSiteContainervirtual
getStateValueAt(size_t siteIndex, const std::string &sequenceName, int state) const =0bpp::VectorSiteContainervirtual
getStateValueAt(size_t siteIndex, const std::string &sequenceName, int state) constbpp::VectorSiteContainervirtual
getStateValueAt(size_t siteIndex, size_t sequenceIndex, int state) constbpp::VectorSiteContainervirtual
getStateValueAt(size_t siteIndex, const std::string &sequenceName, int state) constbpp::VectorSiteContainervirtual
getStateValueAt(size_t siteIndex, size_t sequenceIndex, int state) constbpp::VectorSiteContainervirtual
getSymbolListSite(size_t siteIndex) constbpp::VectorSiteContainervirtual
getSymbolListSite(size_t siteIndex)bpp::VectorSiteContainervirtual
group_bpp::PolymorphismSequenceContainerprivate
hasObject(const std::string &name) constbpp::VectorSiteContainervirtual
hasOutgroup() constbpp::PolymorphismSequenceContainer
hasSequence(const std::string &name) constbpp::VectorSiteContainervirtual
hasSequence(const std::string &name) constbpp::VectorSiteContainervirtual
incrementSequenceCount(size_t index)bpp::PolymorphismSequenceContainer
incrementSequenceCount(const std::string &name)bpp::PolymorphismSequenceContainer
ingroup_bpp::PolymorphismSequenceContainerprivate
insertObject(std::shared_ptr< Site > object, size_t objectIndex)bpp::VectorSiteContainer
insertObject(std::shared_ptr< T > object, size_t objectIndex)bpp::VectorSiteContainervirtual
insertObject(std::shared_ptr< Sequence > object, size_t objectIndex, const std::string &name)bpp::VectorSiteContainer
insertObject(std::shared_ptr< T > object, size_t objectIndex, const std::string &name)=0bpp::VectorSiteContainerpure virtual
insertObject(std::shared_ptr< T > object, size_t objectIndex)bpp::VectorSiteContainervirtual
VectorPositionedContainer< Site >::insertObject(std::shared_ptr< Site > object, size_t objectIndex)VectorPositionedContainer< Site >
VectorMappedContainer< Sequence >::insertObject(std::shared_ptr< Sequence > object, size_t objectIndex, const std::string &name)VectorMappedContainer< Sequence >
isAvailablePosition(size_t objectIndex) constbpp::VectorSiteContainer
isAvailablePosition(size_t objectIndex) constbpp::VectorSiteContainer
isIngroupMember(size_t index) constbpp::PolymorphismSequenceContainer
isIngroupMember(const std::string &name) constbpp::PolymorphismSequenceContainer
MappedNamedContainer()bpp::MappedNamedContainer< class >
MappedNamedContainer(const std::map< std::string, std::shared_ptr< T > > &ms)bpp::MappedNamedContainer< class >
MappedNamedContainer(const MappedNamedContainer &msc)bpp::MappedNamedContainer< class >
mNames_bpp::VectorSiteContainerprivate
mObjects_bpp::VectorSiteContainerprivate
NamedContainer()bpp::NamedContainer< class >private
operator()(const std::string &sequenceName, size_t elementIndex)bpp::VectorSiteContainervirtual
operator()(const std::string &sequenceName, size_t elementIndex) constbpp::VectorSiteContainervirtual
operator()(size_t sequenceIndex, size_t elementIndex)bpp::VectorSiteContainervirtual
operator()(size_t sequenceIndex, size_t elementIndex) constbpp::VectorSiteContainervirtual
operator()(size_t siteIndex, const std::string &sequenceName, int state) constbpp::VectorSiteContainervirtual
operator()(size_t siteIndex, size_t sequenceIndex, int state) constbpp::VectorSiteContainervirtual
operator()(const std::string &sequenceName, size_t elementIndex)bpp::VectorSiteContainervirtual
operator()(const std::string &sequenceName, size_t elementIndex) constbpp::VectorSiteContainervirtual
operator()(size_t sequenceIndex, size_t elementIndex)bpp::VectorSiteContainervirtual
operator()(size_t sequenceIndex, size_t elementIndex) constbpp::VectorSiteContainervirtual
operator()(size_t siteIndex, const std::string &sequenceName, int state) constbpp::VectorSiteContainervirtual
operator()(size_t siteIndex, size_t sequenceIndex, int state) constbpp::VectorSiteContainervirtual
operator=(const PolymorphismSequenceContainer &psc)bpp::PolymorphismSequenceContainer
bpp::VectorSiteContainer::operator=(const VectorSiteContainer &vsc)bpp::VectorSiteContainer
bpp::VectorSiteContainer::operator=(const SiteContainer &sc)bpp::VectorSiteContainer
bpp::VectorSiteContainer::operator=(const OrderedSequenceContainer &osc)bpp::VectorSiteContainer
bpp::VectorSiteContainer::operator=(const SequenceContainer &sc)bpp::VectorSiteContainer
bpp::AbstractSequenceContainer::operator=(const AbstractSequenceContainer &sc)bpp::AbstractSequenceContainer
bpp::AbstractValuesContainer::operator=(const AbstractValuesContainer &sc)bpp::AbstractValuesContainer
bpp::Commentable::operator=(const Commentable &com)bpp::Commentable
bpp::VectorPositionedContainer< Site >::operator=(const VectorPositionedContainer< Site > &vsc)VectorPositionedContainer< Site >
VectorMappedContainer< Sequence >::operator=(const VectorMappedContainer &vsc)VectorMappedContainer< Sequence >
bpp::MappedNamedContainer::operator=(const MappedNamedContainer &msc)bpp::MappedNamedContainer< class >
bpp::VectorPositionedContainer::operator=(const VectorPositionedContainer< T > &vsc)bpp::VectorPositionedContainer< class >
OrderedSequenceContainer()bpp::OrderedSequenceContainer
OrderedValuesContainer()bpp::OrderedValuesContainer
PolymorphismSequenceContainer(const Alphabet *alpha)bpp::PolymorphismSequenceContainer
PolymorphismSequenceContainer(size_t size, const Alphabet *alpha)bpp::PolymorphismSequenceContainer
PolymorphismSequenceContainer(const std::vector< std::string > &names, const Alphabet *alpha)bpp::PolymorphismSequenceContainer
PolymorphismSequenceContainer(const OrderedSequenceContainer &sc)bpp::PolymorphismSequenceContainer
PolymorphismSequenceContainer(const OrderedSequenceContainer &sc, bool count)bpp::PolymorphismSequenceContainer
PolymorphismSequenceContainer(const SiteContainer &sc)bpp::PolymorphismSequenceContainer
PolymorphismSequenceContainer(const SiteContainer &sc, bool count)bpp::PolymorphismSequenceContainer
PolymorphismSequenceContainer(const PolymorphismSequenceContainer &psc)bpp::PolymorphismSequenceContainer
PositionedContainer()bpp::PositionedContainer< class >
positions_bpp::VectorSiteContainerprotected
positions_bpp::VectorSiteContainerprotected
realloc(size_t n)bpp::VectorSiteContainerprotected
reindexSites()bpp::VectorSiteContainervirtual
reindexSites()bpp::VectorSiteContainervirtual
removeObject(size_t objectIndex)bpp::VectorSiteContainervirtual
removeObject(size_t objectIndex)bpp::VectorSiteContainervirtual
removeObject(const std::string &name)bpp::VectorSiteContainervirtual
removeSequence(size_t index)bpp::PolymorphismSequenceContainervirtual
removeSequence(const std::string &name)bpp::PolymorphismSequenceContainervirtual
SequenceContainer()bpp::SequenceContainer
SequencedValuesContainer()bpp::SequencedValuesContainer
setAsIngroupMember(size_t index)bpp::PolymorphismSequenceContainer
setAsIngroupMember(const std::string &name)bpp::PolymorphismSequenceContainer
setAsOutgroupMember(size_t index)bpp::PolymorphismSequenceContainer
setAsOutgroupMember(const std::string &name)bpp::PolymorphismSequenceContainer
setComments(const std::string &name, const Comments &comments)bpp::VectorSiteContainervirtual
setComments(const Comments &comments)bpp::VectorSiteContainer
setComments(size_t sequenceIndex, const Comments &comments)bpp::VectorSiteContainervirtual
setComments(const std::string &name, const Comments &comments)=0bpp::VectorSiteContainervirtual
setComments(size_t sequenceIndex, const Comments &comments)=0bpp::VectorSiteContainervirtual
setComments(size_t sequenceIndex, const Comments &comments)bpp::VectorSiteContainervirtual
setComments(const std::string &name, const Comments &comments)=0bpp::VectorSiteContainervirtual
setComments(size_t sequenceIndex, const Comments &comments)=0bpp::VectorSiteContainervirtual
setGeneralComments(const Comments &comments)=0bpp::VectorSiteContainerpure virtual
setGeneralComments(const Comments &comments)bpp::VectorSiteContainervirtual
setGeneralComments(const Comments &comments)bpp::VectorSiteContainervirtual
setGroupId(size_t index, size_t group_id)bpp::PolymorphismSequenceContainer
setGroupId(const std::string &name, size_t group_id)bpp::PolymorphismSequenceContainer
setObjectName(size_t pos, const std::string &name)bpp::VectorSiteContainer
setObjectsNames(const std::vector< std::string > &names)bpp::VectorSiteContainer
setSequence(const std::string &name, const Sequence &sequence, bool checkName)bpp::VectorSiteContainervirtual
setSequence(size_t sequenceIndex, const Sequence &sequence, bool checkName)bpp::VectorSiteContainervirtual
setSequenceCount(size_t index, unsigned int count)bpp::PolymorphismSequenceContainer
setSequenceCount(const std::string &name, unsigned int count)bpp::PolymorphismSequenceContainer
setSequencesNames(const std::vector< std::string > &names, bool checkNames=true)bpp::VectorSiteContainervirtual
setSequencesNames(const std::vector< std::string > &names, bool checkNames=true)bpp::VectorSiteContainervirtual
setSite(size_t siteIndex, const Site &site, bool checkPosition=true)bpp::VectorSiteContainervirtual
setSite(size_t siteIndex, const Site &site, bool checkPosition=true)bpp::VectorSiteContainervirtual
setSitePositions(Vint vPositions)bpp::VectorSiteContainervirtual
setSitePositions(Vint vPositions)bpp::VectorSiteContainervirtual
setSize(size_t size)bpp::VectorSiteContainervirtual
setSize(size_t size)bpp::VectorSiteContainervirtual
SiteContainer()bpp::SiteContainer
toSiteContainer() constbpp::PolymorphismSequenceContainer
toString(const std::string &name) constbpp::VectorSiteContainervirtual
toString(size_t sequenceIndex) constbpp::VectorSiteContainervirtual
toString(size_t sequenceIndex) const =0bpp::VectorSiteContainervirtual
toString(size_t sequenceIndex) constbpp::VectorSiteContainervirtual
toString(size_t sequenceIndex) const =0bpp::VectorSiteContainervirtual
valueAt(const std::string &sequenceName, size_t elementIndex)bpp::VectorSiteContainervirtual
valueAt(const std::string &sequenceName, size_t elementIndex) constbpp::VectorSiteContainervirtual
valueAt(size_t sequenceIndex, size_t elementIndex)bpp::VectorSiteContainervirtual
valueAt(size_t sequenceIndex, size_t elementIndex) constbpp::VectorSiteContainervirtual
valueAt(const std::string &sequenceName, size_t elementIndex)bpp::VectorSiteContainervirtual
valueAt(const std::string &sequenceName, size_t elementIndex) constbpp::VectorSiteContainervirtual
valueAt(size_t sequenceIndex, size_t elementIndex)bpp::VectorSiteContainervirtual
valueAt(size_t sequenceIndex, size_t elementIndex) constbpp::VectorSiteContainervirtual
VectorMappedContainer()VectorMappedContainer< Sequence >
VectorMappedContainer(const VectorMappedContainer &vsc)VectorMappedContainer< Sequence >
VectorPositionedContainer< Site >::VectorPositionedContainer(const std::vector< std::shared_ptr< Site > > &vs)VectorPositionedContainer< Site >
VectorPositionedContainer< Site >::VectorPositionedContainer(size_t size=0)VectorPositionedContainer< Site >
VectorPositionedContainer< Site >::VectorPositionedContainer(const VectorPositionedContainer< Site > &vsc)VectorPositionedContainer< Site >
VectorMappedContainer< Sequence >::VectorPositionedContainer(const std::vector< std::shared_ptr< T > > &vs)bpp::VectorPositionedContainer< class >
VectorMappedContainer< Sequence >::VectorPositionedContainer(size_t size=0)bpp::VectorPositionedContainer< class >
VectorMappedContainer< Sequence >::VectorPositionedContainer(const VectorPositionedContainer< T > &vsc)bpp::VectorPositionedContainer< class >
VectorSiteContainer(const std::vector< const CruxSymbolListSite * > &vs, const Alphabet *alpha, bool checkPositions=true)bpp::VectorSiteContainer
VectorSiteContainer(const std::vector< const Site * > &vs, const Alphabet *alpha, bool checkPositions=true)bpp::VectorSiteContainer
VectorSiteContainer(size_t size, const Alphabet *alpha)bpp::VectorSiteContainer
VectorSiteContainer(const std::vector< std::string > &names, const Alphabet *alpha)bpp::VectorSiteContainer
VectorSiteContainer(const Alphabet *alpha)bpp::VectorSiteContainer
VectorSiteContainer(const VectorSiteContainer &vsc)bpp::VectorSiteContainer
VectorSiteContainer(const SiteContainer &sc)bpp::VectorSiteContainer
VectorSiteContainer(const OrderedSequenceContainer &osc)bpp::VectorSiteContainer
VectorSiteContainer(const SequenceContainer &sc)bpp::VectorSiteContainer
VectorSiteContainer(const AlignedValuesContainer &avc)bpp::VectorSiteContainer
vNames_bpp::VectorSiteContainerprivate
~AbstractSequenceContainer()bpp::AbstractSequenceContainervirtual
~AbstractValuesContainer()bpp::AbstractValuesContainervirtual
~AlignedValuesContainer()bpp::AlignedValuesContainervirtual
~Clonable()=defaultbpp::Clonablevirtual
~Commentable()bpp::Commentablevirtual
~MappedNamedContainer()bpp::MappedNamedContainer< class >virtual
~NamedContainer()bpp::NamedContainer< class >privatevirtual
~OrderedSequenceContainer()bpp::OrderedSequenceContainervirtual
~OrderedValuesContainer()bpp::OrderedValuesContainervirtual
~PolymorphismSequenceContainer()bpp::PolymorphismSequenceContainervirtual
~PositionedContainer()bpp::PositionedContainer< class >virtual
~PositionedNamedContainer()bpp::PositionedNamedContainer< class >virtual
~SequenceContainer()bpp::SequenceContainervirtual
~SequencedValuesContainer()bpp::SequencedValuesContainervirtual
~SiteContainer()bpp::SiteContainervirtual
VectorPositionedContainer< Site >::~VectorPositionedContainer()VectorPositionedContainer< Site >virtual
VectorMappedContainer< Sequence >::~VectorPositionedContainer()bpp::VectorPositionedContainer< class >virtual
~VectorSiteContainer()bpp::VectorSiteContainervirtual