bpp-seq-omics  2.4.1
bpp::BasicSequenceFeature Member List

This is the complete list of members for bpp::BasicSequenceFeature, including all inherited members.

attributes_bpp::BasicSequenceFeaturemutableprotected
BasicSequenceFeature()bpp::BasicSequenceFeatureinline
BasicSequenceFeature(const std::string &id, const std::string &seqId, const std::string &source, const std::string &type, size_t start, size_t end, char strand, double score=-1)bpp::BasicSequenceFeatureinline
clone() constbpp::BasicSequenceFeatureinlinevirtual
getAttribute(const std::string &attribute) constbpp::BasicSequenceFeatureinlinevirtual
getAttribute(const std::string &attribute)bpp::BasicSequenceFeatureinlinevirtual
getAttributeList() constbpp::BasicSequenceFeatureinlinevirtual
getEnd() constbpp::BasicSequenceFeatureinlinevirtual
getId() constbpp::BasicSequenceFeatureinlinevirtual
getRange() constbpp::BasicSequenceFeatureinlinevirtual
getScore() constbpp::BasicSequenceFeatureinlinevirtual
getSequenceId() constbpp::BasicSequenceFeatureinlinevirtual
getSource() constbpp::BasicSequenceFeatureinlinevirtual
getStart() constbpp::BasicSequenceFeatureinlinevirtual
getType() constbpp::BasicSequenceFeatureinlinevirtual
id_bpp::BasicSequenceFeatureprotected
includes(const SeqRange &range) constbpp::BasicSequenceFeatureinlinevirtual
invert()bpp::BasicSequenceFeatureinlinevirtual
isEmpty() constbpp::SequenceFeatureinlinevirtual
isIncludedIn(const SeqRange &range) constbpp::BasicSequenceFeatureinlinevirtual
isNegativeStrand() constbpp::BasicSequenceFeatureinlinevirtual
isPoint() constbpp::SequenceFeatureinlinevirtual
isStranded() constbpp::BasicSequenceFeatureinlinevirtual
NO_ATTRIBUTE_SETbpp::SequenceFeaturestatic
overlap(const SequenceFeature &feat) constbpp::BasicSequenceFeatureinlinevirtual
overlap(const SeqRange &range) constbpp::BasicSequenceFeatureinlinevirtual
range_bpp::BasicSequenceFeatureprotected
removeAttribute(const std::string &attribute)bpp::BasicSequenceFeatureinlinevirtual
score_bpp::BasicSequenceFeatureprotected
sequenceId_bpp::BasicSequenceFeatureprotected
setAttribute(const std::string &attribute, const std::string &value)bpp::BasicSequenceFeatureinlinevirtual
setId(const std::string &id)bpp::BasicSequenceFeatureinlinevirtual
setScore(double score)bpp::BasicSequenceFeatureinlinevirtual
setSequenceId(const std::string &sid)bpp::BasicSequenceFeatureinlinevirtual
setSource(const std::string &source)bpp::BasicSequenceFeatureinlinevirtual
setType(const std::string &type)bpp::BasicSequenceFeatureinlinevirtual
size() constbpp::SequenceFeatureinlinevirtual
source_bpp::BasicSequenceFeatureprotected
type_bpp::BasicSequenceFeatureprotected
~Clonable()=defaultbpp::Clonablevirtual