bpp-seq3  3.0.0
bpp::AlphabetTools Member List

This is the complete list of members for bpp::AlphabetTools, including all inherited members.

alphabetInheritsFrom(const Alphabet &alphabet)bpp::AlphabetToolsinlineprivatestatic
AlphabetTools()bpp::AlphabetToolsinline
checkAlphabetCodingSize(const Alphabet &alphabet)bpp::AlphabetToolsstatic
checkAlphabetCodingSize(const Alphabet *alphabet)bpp::AlphabetToolsstatic
DEFAULT_ALPHABETbpp::AlphabetToolsstatic
DNA_ALPHABETbpp::AlphabetToolsstatic
DNA_CODON_ALPHABETbpp::AlphabetToolsstatic
getAlphabetCodingSize(const Alphabet &alphabet)bpp::AlphabetToolsstatic
getAlphabetCodingSize(const Alphabet *alphabet)bpp::AlphabetToolsstatic
getType(char state)bpp::AlphabetToolsstatic
isAllelicAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isBinaryAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isCodonAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isDefaultAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isDNAAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isIntegerAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isNucleicAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isProteicAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isRNAAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isRNYAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
isWordAlphabet(const Alphabet &alphabet)bpp::AlphabetToolsinlinestatic
match(std::shared_ptr< const Alphabet > alphabet, int i, int j)bpp::AlphabetToolsinlinestatic
PROTEIN_ALPHABETbpp::AlphabetToolsstatic
RNA_ALPHABETbpp::AlphabetToolsstatic
RNA_CODON_ALPHABETbpp::AlphabetToolsstatic
~AlphabetTools()bpp::AlphabetToolsinlinevirtual