bpp-seq3  3.0.0
bpp::CoreSequenceInterface Member List

This is the complete list of members for bpp::CoreSequenceInterface, including all inherited members.

alphabet() const =0bpp::CruxSymbolListInterfacepure virtual
clearComments()=0bpp::Commentablepure virtual
clone() const override=0bpp::CoreSequenceInterfacepure virtual
Commentable()bpp::Commentableinline
CoreSequenceInterface()bpp::CoreSequenceInterfaceinline
deleteElement(size_t pos)=0bpp::CruxSymbolListInterfacepure virtual
deleteElements(size_t pos, size_t len)=0bpp::CruxSymbolListInterfacepure virtual
getAlphabet() const =0bpp::CruxSymbolListInterfacepure virtual
getComments() const =0bpp::Commentablepure virtual
getName() const =0bpp::CoreSequenceInterfacepure virtual
getStateValueAt(size_t position, int state) const =0bpp::CruxSymbolListInterfacepure virtual
operator()(size_t position, int state) const =0bpp::CruxSymbolListInterfacepure virtual
setComments(const Comments &comments)=0bpp::Commentablepure virtual
setName(const std::string &name)=0bpp::CoreSequenceInterfacepure virtual
setToSizeL(size_t newSize)=0bpp::CoreSequenceInterfacepure virtual
setToSizeR(size_t newSize)=0bpp::CoreSequenceInterfacepure virtual
shuffle()=0bpp::CruxSymbolListInterfacepure virtual
size() const =0bpp::CruxSymbolListInterfacepure virtual
toString() const =0bpp::CruxSymbolListInterfacepure virtual
~Clonable()=defaultbpp::Clonablevirtual
~Commentable()bpp::Commentableinlinevirtual
~CoreSequenceInterface()bpp::CoreSequenceInterfaceinlinevirtual
~CruxSymbolListInterface()bpp::CruxSymbolListInterfaceinlinevirtual