bpp-core3  3.0.0
bpp::CoreSiteInterface Member List

This is the complete list of members for bpp::CoreSiteInterface, including all inherited members.

alphabet() const =0bpp::CruxSymbolListInterfacepure virtual
clone() const override=0bpp::CoreSiteInterfacepure virtual
deleteElement(size_t pos)=0bpp::CruxSymbolListInterfacepure virtual
deleteElements(size_t pos, size_t len)=0bpp::CruxSymbolListInterfacepure virtual
getAlphabet() const =0bpp::CruxSymbolListInterfacepure virtual
getCoordinate() const =0bpp::CoreSiteInterfacepure virtual
getStateValueAt(size_t sequencePosition, int state) const override=0bpp::CoreSiteInterfacepure virtual
operator()(size_t position, int state) const =0bpp::CruxSymbolListInterfacepure virtual
setCoordinate(int coordinate)=0bpp::CoreSiteInterfacepure virtual
shuffle()=0bpp::CruxSymbolListInterfacepure virtual
size() const =0bpp::CruxSymbolListInterfacepure virtual
toString() const =0bpp::CruxSymbolListInterfacepure virtual
~CoreSiteInterface()bpp::CoreSiteInterfaceinlinevirtual
~CruxSymbolListInterface()bpp::CruxSymbolListInterfaceinlinevirtual