bpp::GranthamAAChemicalDistance Member List

This is the complete list of members for bpp::GranthamAAChemicalDistance, including all inherited members.

alphabet() const override	bpp::ProteicAlphabetIndex2	inlinevirtual
AlphabetIndex2()	bpp::AlphabetIndex2	inline
clone() const override	bpp::GranthamAAChemicalDistance	inlinevirtual
computeIndexMatrix_()	bpp::GranthamAAChemicalDistance	protected
distanceMatrix_	bpp::GranthamAAChemicalDistance	private
getAlphabet() const override	bpp::ProteicAlphabetIndex2	inlinevirtual
getIndex(int state1, int state2) const override	bpp::GranthamAAChemicalDistance	virtual
getIndex(const std::string &state1, const std::string &state2) const override	bpp::GranthamAAChemicalDistance	virtual
getIndexMatrix() const override	bpp::GranthamAAChemicalDistance	inlinevirtual
GranthamAAChemicalDistance()	bpp::GranthamAAChemicalDistance
GranthamAAChemicalDistance(const GranthamAAChemicalDistance &gd)	bpp::GranthamAAChemicalDistance	inline
indexMatrix_	bpp::GranthamAAChemicalDistance	private
isSymmetric() const override	bpp::GranthamAAChemicalDistance	inlinevirtual
operator=(const GranthamAAChemicalDistance &gd)	bpp::GranthamAAChemicalDistance	inline
bpp::ProteicAlphabetIndex2::operator=(const ProteicAlphabetIndex2 &pt)	bpp::ProteicAlphabetIndex2	inline
ProteicAlphabetIndex2()	bpp::ProteicAlphabetIndex2	inline
ProteicAlphabetIndex2(const ProteicAlphabetIndex2 &pt)	bpp::ProteicAlphabetIndex2	inline
setPC1Sign(bool yn)	bpp::GranthamAAChemicalDistance	inline
setSymmetric(bool yn)	bpp::GranthamAAChemicalDistance	inline
sign_	bpp::GranthamAAChemicalDistance	private
SIGN_ARBITRARY	bpp::GranthamAAChemicalDistance	static
SIGN_NONE	bpp::GranthamAAChemicalDistance	static
SIGN_PC1	bpp::GranthamAAChemicalDistance	static
signMatrix_	bpp::GranthamAAChemicalDistance	private
~AlphabetIndex2()	bpp::AlphabetIndex2	inlinevirtual
~GranthamAAChemicalDistance()	bpp::GranthamAAChemicalDistance	inlinevirtual
~ProteicAlphabetIndex2()	bpp::ProteicAlphabetIndex2	inlinevirtual