bpp-seq3  3.0.0
bpp::SequenceWithQualityTools Member List

This is the complete list of members for bpp::SequenceWithQualityTools, including all inherited members.

complement(const SequenceWithQuality &sequence)bpp::SequenceWithQualityToolsstatic
concatenate(const SequenceWithQuality &seqwq1, const SequenceWithQuality &seqwq2)bpp::SequenceWithQualityToolsstatic
DNA_bpp::SequenceWithQualityToolsprivatestatic
DNARep_bpp::SequenceWithQualityToolsprivatestatic
invert(const SequenceWithQuality &sequence)bpp::SequenceWithQualityToolsstatic
removeGaps(const SequenceWithQuality &seq)bpp::SequenceWithQualityToolsstatic
reverseTranscript(const SequenceWithQuality &sequence)bpp::SequenceWithQualityToolsstatic
RNA_bpp::SequenceWithQualityToolsprivatestatic
RNARep_bpp::SequenceWithQualityToolsprivatestatic
subseq(const SequenceWithQuality &sequence, size_t begin, size_t end, SequenceWithQuality &output)bpp::SequenceWithQualityToolsinlinestatic
subseq(const SequenceWithQuality &sequence, size_t begin, size_t end)bpp::SequenceWithQualityToolsinlinestatic
transc_bpp::SequenceWithQualityToolsprivatestatic
transcript(const SequenceWithQuality &sequence)bpp::SequenceWithQualityToolsstatic