Phylogenetic tree of the HBG004301 gene family of HOVERGEN database

UniprotKB : P18848
Family Alignment Download SRS Archeopteryx
UniProtKB Accession numberSpecies
Display : UniprotKBSpeciesHOVERGENRaw
Sauropsida⇒NCBI("reptiles")
Aves⇒NCBI(birds)
Amphibia⇒NCBI
Actinopterygii⇒NCBI(bony fish)
Chondrichthyes⇒NCBI(cartilaginous fish)
Primates⇒NCBI
Rodentia⇒NCBI
Cetartiodactyla⇒NCBI
Lagomorpha⇒NCBI
Carnivora⇒NCBI
Perissodactyla⇒NCBI
Insectivora⇒NCBI
Others
Note: Entries which are not found in UniprotKB are tagged with a # character.

  • TREE CALCULATED WITH PHYML

  • ALIGNMENT CALCULATED WITH MUSCLE



If you use families from HOVERGEN, HOMOLENS or HOGENOM, Please cite :

Penel S, Arigon AM, Dufayard JF, Sertier AS, Daubin V, Duret L, Gouy M and Perrière G (2009)
"Databases of homologous gene families for comparative genomics" BMC Bioinformatics, 10 (Suppl 6):S3

If you use families HOMOLENS,please cite as well Ensembl as specified here


Tree display perl modules by Li Heng.(Ruan et al. (2008)"TreeFam: 2008 Update." Nucleic Acid Res. 36 (Database issue):D735-40)
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