(data stored in SCRATCH zone)

SWISSPROT: A0A0E1NX43_YERPA

ID   A0A0E1NX43_YERPA        Unreviewed;       610 AA.
AC   A0A0E1NX43;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   05-DEC-2018, entry version 21.
DE   SubName: Full=ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ABG12158.1};
DE            EC=3.6.1.- {ECO:0000313|EMBL:ABG12158.1};
GN   OrderedLocusNames=YPA_0189 {ECO:0000313|EMBL:ABG12158.1};
OS   Yersinia pestis bv. Antiqua (strain Antiqua).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Yersiniaceae; Yersinia.
OX   NCBI_TaxID=360102 {ECO:0000313|EMBL:ABG12158.1, ECO:0000313|Proteomes:UP000001971};
RN   [1] {ECO:0000313|EMBL:ABG12158.1, ECO:0000313|Proteomes:UP000001971}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Antiqua {ECO:0000313|EMBL:ABG12158.1,
RC   ECO:0000313|Proteomes:UP000001971};
RX   PubMed=16740952; DOI=10.1128/JB.00124-06;
RA   Chain P.S., Hu P., Malfatti S.A., Radnedge L., Larimer F.,
RA   Vergez L.M., Worsham P., Chu M.C., Andersen G.L.;
RT   "Complete genome sequence of Yersinia pestis strains Antiqua and
RT   Nepal516: evidence of gene reduction in an emerging pathogen.";
RL   J. Bacteriol. 188:4453-4463(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000308; ABG12158.1; -; Genomic_DNA.
DR   RefSeq; WP_002211484.1; NZ_CP009906.1.
DR   EnsemblBacteria; ABG12158; ABG12158; YPA_0189.
DR   EnsemblBacteria; AJJ81544; AJJ81544; CH58_3034.
DR   KEGG; ypa:YPA_0189; -.
DR   PATRIC; fig|360102.15.peg.3185; -.
DR   KO; K03654; -.
DR   OMA; QDMFLME; -.
DR   Proteomes; UP000001971; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR   GO; GO:0009432; P:SOS response; IEA:InterPro.
DR   CDD; cd00079; HELICc; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR004589; DNA_helicase_ATP-dep_RecQ.
DR   InterPro; IPR006293; DNA_helicase_ATP-dep_RecQ_bac.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR032284; RecQ_Zn-bd.
DR   InterPro; IPR018982; RQC_domain.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   Pfam; PF16124; RecQ_Zn_bind; 1.
DR   Pfam; PF09382; RQC; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SMART; SM00956; RQC; 1.
DR   SUPFAM; SSF47819; SSF47819; 1.
DR   SUPFAM; SSF52540; SSF52540; 2.
DR   TIGRFAMs; TIGR01389; recQ; 1.
DR   TIGRFAMs; TIGR00614; recQ_fam; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
DR   PRODOM; A0A0E1NX43.
DR   SWISS-2DPAGE; A0A0E1NX43.
KW   ATP-binding {ECO:0000313|EMBL:ABG12158.1};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001971};
KW   Helicase {ECO:0000313|EMBL:ABG12158.1};
KW   Hydrolase {ECO:0000313|EMBL:ABG12158.1};
KW   Nucleotide-binding {ECO:0000313|EMBL:ABG12158.1}.
SQ   SEQUENCE   610 AA;  68313 MW;  8DE2462AC47BAFE7 CRC64;
     MSTAAVINRE LLAVQVLRDT FGYQQFRPGQ QEIINATLSG QDCLVVMPTG GGKSLCYQIP
     ALVTDGLTLV VSPLISLMKD QVDQLLAYGV GAGCLNSSQT REQQLAVMDG CRSGQIKLLY
     IAPERLVMES FLDQLYQWRP ALLAVDEAHC ISQWGHDFRP EYRALGQLKQ RFPDLPVIAL
     TATADEATRG DIVRLLNLDQ PLIQISSFDR PNIRYTLVEK FKPLDQLWRF VQDQRGKSGI
     IYCNSRAKVE DTTARLQSRG LSVAAYHAGL DNERRAQVQE AFQRDDLQVV VATVAFGMGI
     NKPNVRFVVH FDIPRTIESY YQETGRAGRD GLPAEAVLLY DPADMAWLRR CLEEKPAGAQ
     QDIERHKLNA MGAFAEAQTC RRLVLLNYFG EGKQQPCGNC DICLDPPKRY DGLADAQKAL
     SCVYRVGQRF GLGYIVEVLR GANNQRIREM GHDKLSVYGI GREQTHEHWV SVLRQLIHLG
     LLSQNIAQFS ALQLTEAARP VLRAELPLQL AVPRIQSLKV RSSANQKSYG GNYDRKLFAK
     LRKLRKSIAD EGNIPPYVVF NDATLLEMAE QMPITASELL SVNGVGQRKL ERFGAPFMAL
     IRDHVDNNDD
//

If you have problems or comments...

PBIL Back to PBIL home page