(data stored in SCRATCH zone)

SWISSPROT: A0A0F6BIK1_GEOS0

ID   A0A0F6BIK1_GEOS0        Unreviewed;       437 AA.
AC   A0A0F6BIK1;
DT   24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT   24-JUN-2015, sequence version 1.
DT   13-FEB-2019, entry version 26.
DE   SubName: Full=RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:ADP73252.1};
GN   OrderedLocusNames=GY4MC1_0411 {ECO:0000313|EMBL:ADP73252.1};
OS   Geobacillus sp. (strain Y4.1MC1).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.
OX   NCBI_TaxID=581103 {ECO:0000313|EMBL:ADP73252.1, ECO:0000313|Proteomes:UP000002034};
RN   [1] {ECO:0000313|EMBL:ADP73252.1, ECO:0000313|Proteomes:UP000002034}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Y4.1MC1 {ECO:0000313|EMBL:ADP73252.1,
RC   ECO:0000313|Proteomes:UP000002034};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Chertkov O., Zhang X., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N.,
RA   Ovchinnikova G., Brumm P., Mead D., Woyke T.;
RT   "Complete sequence of chromosome of Geobacillus sp. Y4.1MC1.";
RL   Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP002293; ADP73252.1; -; Genomic_DNA.
DR   RefSeq; WP_003248101.1; NC_014650.1.
DR   EnsemblBacteria; ADP73252; ADP73252; GY4MC1_0411.
DR   GeneID; 29236929; -.
DR   KEGG; gmc:GY4MC1_0411; -.
DR   KO; K03092; -.
DR   OMA; VTTQKFM; -.
DR   OrthoDB; 1906842at2; -.
DR   BioCyc; GSP581103:G1GOQ-458-MONOMER; -.
DR   Proteomes; UP000002034; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.1330; -; 1.
DR   InterPro; IPR000394; RNA_pol_sigma_54.
DR   InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR   InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR   InterPro; IPR038709; RpoN_core-bd_sf.
DR   PANTHER; PTHR32248; PTHR32248; 1.
DR   Pfam; PF00309; Sigma54_AID; 1.
DR   Pfam; PF04963; Sigma54_CBD; 1.
DR   Pfam; PF04552; Sigma54_DBD; 1.
DR   PIRSF; PIRSF000774; RpoN; 1.
DR   PRINTS; PR00045; SIGMA54FCT.
DR   TIGRFAMs; TIGR02395; rpoN_sigma; 1.
DR   PROSITE; PS00717; SIGMA54_1; 1.
DR   PROSITE; PS00718; SIGMA54_2; 1.
PE   4: Predicted;
DR   PRODOM; A0A0F6BIK1.
DR   SWISS-2DPAGE; A0A0F6BIK1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002034}.
FT   DOMAIN       70    258       Sigma54_CBD. {ECO:0000259|Pfam:PF04963}.
FT   DOMAIN      272    433       Sigma54_DBD. {ECO:0000259|Pfam:PF04552}.
SQ   SEQUENCE   437 AA;  51051 MW;  8837AE4AEB853E1F CRC64;
     MRAELWQEQR LKLSLTKELT QAIELLQYSA VELQSFLYEQ SLDNPFLEIR DYRLKRSYRD
     SSDKEKQRWI ENISTHSETL SLHLIAQLPA LSLSEREERV VRYMIASLDE DGYLRVEIEE
     IAARLAISKQ EAEKALQIIQ SLEPAGVGAR SLQECLYLQL KRLPHRDELA EQIVQHHFSL
     FVEKAWKTLA KQLDIDIASL QRVWDLIRTL EPRPGIHYTK EMPHFIVPDL IIERSDEGDW
     RIFCNDDVHP ELAWNRAYEQ KISGYRDGQV QSFIKDKYRQ FLWLTKSLEQ RKQTLLNIMH
     VIVDKQKQCL EAGFAALKPL TMREVAEELG IHESTVSRAV KNKYVQTPFG TVELRRFFSN
     AVSSAYADDD AASSVKVKMF IKQLIEQENK QRPLSDQKIA DLLHERYGVA VSRRTVAKYR
     EQLHIPSSAK RKQYVGK
//

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