(data stored in SCRATCH zone)

SWISSPROT: A0A1P8BHF5_ARATH

ID   A0A1P8BHF5_ARATH        Unreviewed;       307 AA.
AC   A0A1P8BHF5;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   30-AUG-2017, entry version 4.
DE   SubName: Full=2-oxoglutarate-dependent dioxygenase family protein {ECO:0000313|EMBL:ANM71030.1};
GN   OrderedLocusNames=At5g01780 {ECO:0000313|EMBL:ANM71030.1};
GN   ORFNames=T20L15.50 {ECO:0000313|EMBL:ANM71030.1}, T20L15_50
GN   {ECO:0000313|EMBL:ANM71030.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:ANM71030.1, ECO:0000313|Proteomes:UP000006548};
RN   [1] {ECO:0000313|EMBL:ANM71030.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|EMBL:ANM71030.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:ANM71030.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RA   Lavstsen T., Jespersen J.S.;
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002688; ANM71029.1; -; Genomic_DNA.
DR   EMBL; CP002688; ANM71030.1; -; Genomic_DNA.
DR   RefSeq; NP_001332589.1; NM_001342621.1.
DR   RefSeq; NP_001332590.1; NM_001342622.1.
DR   EnsemblPlants; AT5G01780.3; AT5G01780.3; AT5G01780.
DR   EnsemblPlants; AT5G01780.4; AT5G01780.4; AT5G01780.
DR   GeneID; 831672; -.
DR   Gramene; AT5G01780.3; AT5G01780.3; AT5G01780.
DR   Gramene; AT5G01780.4; AT5G01780.4; AT5G01780.
DR   Proteomes; UP000006548; Chromosome 5.
DR   GO; GO:0051213; F:dioxygenase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   Gene3D; 2.60.120.590; -; 1.
DR   InterPro; IPR004574; Alkb.
DR   InterPro; IPR027450; AlkB-like.
DR   InterPro; IPR005123; Oxoglu/Fe-dep_dioxygenase.
DR   PANTHER; PTHR16557; PTHR16557; 1.
DR   Pfam; PF13532; 2OG-FeII_Oxy_2; 1.
DR   PROSITE; PS51471; FE2OG_OXY; 1.
PE   4: Predicted;
DR   PRODOM; A0A1P8BHF5.
DR   SWISS-2DPAGE; A0A1P8BHF5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Dioxygenase {ECO:0000313|EMBL:ANM71030.1};
KW   Oxidoreductase {ECO:0000313|EMBL:ANM71030.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT   DOMAIN      197    307       Fe2OG dioxygenase. {ECO:0000259|PROSITE:
FT                                PS51471}.
SQ   SEQUENCE   307 AA;  34603 MW;  D23D59A3B672090F CRC64;
     MVHFDSTNPS SSSKSSQSQN LKIRKVRNHR NSGFKSRDQS PQRIKDPPPF DICSSVLERN
     DTSIKDWILA DETNRETVEV SNKHKVIRPG MVLLKDFLTP DIQVDIVKTC RELGVKPTGF
     YQPGYSVGSK LHLQMMCLGR NWDPQTKYRK NTDIDSKAPE IPVTFNVLVE KAIREAHALI
     DRESGTEDAE RILPVMSPDI CIVNFYSETG RLGLHQDRDE SEESIARGLP IVSFSIGDSA
     EFLYGEKRDV EEAQGVILES GDVLIFGGES RMIFHGVKSI IPNSAPMSLL NESKLRTGRL
     NLTFRHF
//

If you have problems or comments...

PBIL Back to PBIL home page