(data stored in SCRATCH zone)

SWISSPROT: A0KF20_AERHH

ID   A0KF20_AERHH            Unreviewed;       134 AA.
AC   A0KF20;
DT   12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT   12-DEC-2006, sequence version 1.
DT   11-DEC-2019, entry version 84.
DE   RecName: Full=30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508};
GN   Name=rpsJ {ECO:0000256|HAMAP-Rule:MF_00508,
GN   ECO:0000313|EMBL:ABK39221.1};
GN   OrderedLocusNames=AHA_0308 {ECO:0000313|EMBL:ABK39221.1};
OS   Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM
OS   1027 / KCTC 2358 / NCIMB 9240).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales;
OC   Aeromonadaceae; Aeromonas.
OX   NCBI_TaxID=380703 {ECO:0000313|EMBL:ABK39221.1, ECO:0000313|Proteomes:UP000000756};
RN   [1] {ECO:0000313|EMBL:ABK39221.1, ECO:0000313|Proteomes:UP000000756}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240
RC   {ECO:0000313|Proteomes:UP000000756};
RX   PubMed=16980456; DOI=10.1128/JB.00621-06;
RA   Seshadri R., Joseph S.W., Chopra A.K., Sha J., Shaw J., Graf J., Haft D.,
RA   Wu M., Ren Q., Rosovitz M.J., Madupu R., Tallon L., Kim M., Jin S.,
RA   Vuong H., Stine O.C., Ali A., Horneman A.J., Heidelberg J.F.;
RT   "Genome sequence of Aeromonas hydrophila ATCC 7966T: jack of all trades.";
RL   J. Bacteriol. 188:8272-8282(2006).
CC   -!- FUNCTION: Involved in the binding of tRNA to the ribosomes.
CC       {ECO:0000256|HAMAP-Rule:MF_00508}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_00508}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS10 family.
CC       {ECO:0000256|HAMAP-Rule:MF_00508}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP000462; ABK39221.1; -; Genomic_DNA.
DR   RefSeq; WP_011704313.1; NC_008570.1.
DR   RefSeq; YP_854838.1; NC_008570.1.
DR   STRING; 380703.AHA_0308; -.
DR   EnsemblBacteria; ABK39221; ABK39221; AHA_0308.
DR   GeneID; 4488767; -.
DR   KEGG; aha:AHA_0308; -.
DR   PATRIC; fig|380703.7.peg.297; -.
DR   eggNOG; ENOG4108Z10; Bacteria.
DR   eggNOG; COG0051; LUCA.
DR   HOGENOM; HOG000270246; -.
DR   KO; K02946; -.
DR   OMA; REQFQLC; -.
DR   BioCyc; AHYD380703:G1G7B-309-MONOMER; -.
DR   Proteomes; UP000000756; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.70.600; -; 1.
DR   HAMAP; MF_00508; Ribosomal_S10; 1.
DR   InterPro; IPR001848; Ribosomal_S10.
DR   InterPro; IPR018268; Ribosomal_S10_CS.
DR   InterPro; IPR027486; Ribosomal_S10_dom.
DR   InterPro; IPR036838; Ribosomal_S10_dom_sf.
DR   PANTHER; PTHR11700; PTHR11700; 1.
DR   Pfam; PF00338; Ribosomal_S10; 1.
DR   PRINTS; PR00971; RIBOSOMALS10.
DR   SMART; SM01403; Ribosomal_S10; 1.
DR   SUPFAM; SSF54999; SSF54999; 1.
DR   TIGRFAMs; TIGR01049; rpsJ_bact; 1.
DR   PROSITE; PS00361; RIBOSOMAL_S10; 1.
PE   3: Inferred from homology;
DR   PRODOM; A0KF20.
DR   SWISS-2DPAGE; A0KF20.
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000756};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_00508};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_00508,
KW   ECO:0000313|EMBL:ABK39221.1}; Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        15..32
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          38..132
FT                   /note="Ribosomal_S10"
FT                   /evidence="ECO:0000259|SMART:SM01403"
SQ   SEQUENCE   134 AA;  14834 MW;  B16314A4CE237565 CRC64;
     MGGNVKNHTS GGSNLGRAVL IYVLLSIGAL SMQNQRIRIR LKAFDHRLID QSTAEIVETA
     KRTGAQVRGP IPLPTRKERF TVLISPHVNK DARDQYEIRT HKRLVDIVEP TDKTVDALMR
     LDLAAGVDVQ ISLG
//

If you have problems or comments...

PBIL Back to PBIL home page