(data stored in SCRATCH zone)

SWISSPROT: A0KH38_AERHH

ID   A0KH38_AERHH            Unreviewed;       521 AA.
AC   A0KH38;
DT   12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT   12-DEC-2006, sequence version 1.
DT   11-DEC-2019, entry version 97.
DE   SubName: Full=Helix-turn-helix, AraC type:HhH-GPD:Ada, metal-binding:AlkA, N-terminal {ECO:0000313|EMBL:ABK36149.1};
GN   OrderedLocusNames=AHA_1046 {ECO:0000313|EMBL:ABK36149.1};
OS   Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM
OS   1027 / KCTC 2358 / NCIMB 9240).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales;
OC   Aeromonadaceae; Aeromonas.
OX   NCBI_TaxID=380703 {ECO:0000313|EMBL:ABK36149.1, ECO:0000313|Proteomes:UP000000756};
RN   [1] {ECO:0000313|EMBL:ABK36149.1, ECO:0000313|Proteomes:UP000000756}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240
RC   {ECO:0000313|Proteomes:UP000000756};
RX   PubMed=16980456; DOI=10.1128/JB.00621-06;
RA   Seshadri R., Joseph S.W., Chopra A.K., Sha J., Shaw J., Graf J., Haft D.,
RA   Wu M., Ren Q., Rosovitz M.J., Madupu R., Tallon L., Kim M., Jin S.,
RA   Vuong H., Stine O.C., Ali A., Horneman A.J., Heidelberg J.F.;
RT   "Genome sequence of Aeromonas hydrophila ATCC 7966T: jack of all trades.";
RL   J. Bacteriol. 188:8272-8282(2006).
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DR   EMBL; CP000462; ABK36149.1; -; Genomic_DNA.
DR   RefSeq; WP_011704975.1; NC_008570.1.
DR   RefSeq; YP_855588.1; NC_008570.1.
DR   STRING; 380703.AHA_1046; -.
DR   EnsemblBacteria; ABK36149; ABK36149; AHA_1046.
DR   GeneID; 4489494; -.
DR   KEGG; aha:AHA_1046; -.
DR   PATRIC; fig|380703.7.peg.1048; -.
DR   eggNOG; ENOG4105D03; Bacteria.
DR   eggNOG; COG0122; LUCA.
DR   eggNOG; COG2169; LUCA.
DR   HOGENOM; HOG000129321; -.
DR   KO; K13529; -.
DR   OMA; RWPDAFP; -.
DR   BioCyc; AHYD380703:G1G7B-1046-MONOMER; -.
DR   Proteomes; UP000000756; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0008168; F:methyltransferase activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006284; P:base-excision repair; IEA:InterPro.
DR   CDD; cd00056; ENDO3c; 1.
DR   Gene3D; 1.10.1670.10; -; 1.
DR   Gene3D; 3.30.310.20; -; 1.
DR   Gene3D; 3.40.10.10; -; 1.
DR   InterPro; IPR035451; Ada-like_dom_sf.
DR   InterPro; IPR004026; Ada_DNA_repair_Zn-bd.
DR   InterPro; IPR010316; AlkA_N.
DR   InterPro; IPR037046; AlkA_N_sf.
DR   InterPro; IPR011257; DNA_glycosylase.
DR   InterPro; IPR003265; HhH-GPD_domain.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR023170; HTH_base_excis_C.
DR   Pfam; PF02805; Ada_Zn_binding; 1.
DR   Pfam; PF06029; AlkA_N; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM01009; AlkA_N; 1.
DR   SMART; SM00478; ENDO3c; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF48150; SSF48150; 1.
DR   SUPFAM; SSF57884; SSF57884; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; A0KH38.
DR   SWISS-2DPAGE; A0KH38.
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000756};
KW   Transcription {ECO:0000256|SAAS:SAAS00048810};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00048643}.
FT   DOMAIN          103..201
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000259|PROSITE:PS01124"
FT   REGION          198..218
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   521 AA;  57151 MW;  20262AA10362C322 CRC64;
     MPTDHAMTMS PTTGDEAGLP LSAEQCHAAR LARDARFDGR FFTGVLSTGI YCRPVCPARP
     PHEHNVRYFQ SAAAAEQHGL RPCLRCRPEL APAAPGDLPP TLARLLSRID RGELAEGSLT
     TLAEQAGISE RTLRRQFEQH LGASPKQVEQ TRRLLLAKRL LTETRLPITD IAFAAGFASI
     RRFNDAWQQA YGLAPRALRR QSESTGDDAA LTQAEPQTEE GAMLTLQLPY RPPYDVAAML
     AFYRLRAIPG LERVDGEVYE RWHRVGDQVA RVRISQGKGH SLLLSVHDLP PAALPDLLYR
     VRRMWDLDAD MQRIGARLGQ DPLLASLQAR WPGVRLPAGW DEYEVMLRAI VGQQVSVKGA
     ITILGRLVAR TEAQFGMAQL PTPAQLCELN LDGIGMPGSR IRTLQGLAQA LASGELSLIS
     ASDEQLLALP GIGPWTVAYW RLRCGLDPDA FPASDLVLLK ALGGGTKLPV KAVLAHSERW
     RPWRGYAASW LWHAMSEEPA LLTESAPGRA ASDNQAEETT P
//

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