(data stored in SCRATCH zone)

SWISSPROT: A0LFB1_SYNFM

ID   A0LFB1_SYNFM            Unreviewed;       584 AA.
AC   A0LFB1;
DT   12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT   12-DEC-2006, sequence version 1.
DT   08-MAY-2019, entry version 72.
DE   SubName: Full=Uncharacterized domain {ECO:0000313|EMBL:ABK16113.1};
GN   OrderedLocusNames=Sfum_0413 {ECO:0000313|EMBL:ABK16113.1};
OS   Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).
OC   Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales;
OC   Syntrophobacteraceae; Syntrophobacter.
OX   NCBI_TaxID=335543 {ECO:0000313|EMBL:ABK16113.1, ECO:0000313|Proteomes:UP000001784};
RN   [1] {ECO:0000313|EMBL:ABK16113.1, ECO:0000313|Proteomes:UP000001784}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 10017 / MPOB {ECO:0000313|Proteomes:UP000001784};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E.G.,
RA   Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Kim E., Boone D.R., Brockman F., Culley D., Ferry J., Gunsalus R.,
RA   McInerney M.J., Morrison M., Plugge C., Rohlin L., Scholten J.,
RA   Sieber J., Stams A.J.M., Worm P., Henstra A.M., Richardson P.;
RT   "Complete sequence of Syntrophobacter fumaroxidans MPOB.";
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000478; ABK16113.1; -; Genomic_DNA.
DR   RefSeq; WP_011697286.1; NC_008554.1.
DR   STRING; 335543.Sfum_0413; -.
DR   EnsemblBacteria; ABK16113; ABK16113; Sfum_0413.
DR   KEGG; sfu:Sfum_0413; -.
DR   eggNOG; ENOG4107S93; Bacteria.
DR   eggNOG; COG1944; LUCA.
DR   HOGENOM; HOG000010976; -.
DR   KO; K09136; -.
DR   OMA; VERHVCA; -.
DR   OrthoDB; 318986at2; -.
DR   BioCyc; SFUM335543:G1G7I-420-MONOMER; -.
DR   Proteomes; UP000001784; Chromosome.
DR   Gene3D; 1.25.40.10; -; 1.
DR   InterPro; IPR013026; TPR-contain_dom.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR001440; TPR_1.
DR   InterPro; IPR019734; TPR_repeat.
DR   InterPro; IPR003776; YcaO-like_dom.
DR   Pfam; PF00515; TPR_1; 1.
DR   Pfam; PF13181; TPR_8; 1.
DR   Pfam; PF02624; YcaO; 1.
DR   SMART; SM00028; TPR; 4.
DR   SUPFAM; SSF48452; SSF48452; 1.
DR   TIGRFAMs; TIGR00702; TIGR00702; 1.
DR   PROSITE; PS50005; TPR; 4.
DR   PROSITE; PS50293; TPR_REGION; 1.
DR   PROSITE; PS51664; YCAO; 1.
PE   4: Predicted;
DR   PRODOM; A0LFB1.
DR   SWISS-2DPAGE; A0LFB1.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001784};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001784};
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT   DOMAIN       78    430       YcaO. {ECO:0000259|PROSITE:PS51664}.
FT   DOMAIN      423    561       TPR_REGION. {ECO:0000259|PROSITE:
FT                                PS50293}.
FT   REPEAT      423    456       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      460    493       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      494    527       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      528    561       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   COILED      561    581       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   584 AA;  65815 MW;  74435F4CF8ED1D44 CRC64;
     MSSRVFVADC FKAFRHDQDK ARSPDDTVAW VRKRLSGLNV DILNKTIRID TGRLDIPVYI
     SLCGSDATRL TGTKKQMGKG ASPIQAEASA LMELMERYSF FSFIHQSDFP TLRYREVPQQ
     VVSPEDFKRS IHDETTPVDL VRSFLQDFPL RWAVARNLTQ KIYQMIPIDW FYLINEYNGP
     AAGNTIEEAI LQSLCEVVER HVGSVICYGE RPTPTIDPGS VRDPAAVELI DKFRKQGIVL
     HLKDFSLDTG IPSVGALAYD PSTFPDRSEI VFTVGTTSNP EKSLCRALTE IAQLAGDFEN
     RTSYRPTLPK YASLDQARYL TDDHETIPIS ALPDLSHDNM RIEIERCVDA LKRIGMEVMV
     INVEHPELQV PAVYTVIPGA HFLEHTRDTD FAQHAARTIL RGCAPGEVVA QMERLLNLFG
     PRYDLTFFLA HGLELEDKPG PAIPLFRKAL EQEPDPRELA SIHVHIASCH KALGEYEPAL
     EALERAELLN SELKEIYNLR GFCYFKLKKH HEAIEAFEKA IELDPGSAID YANIGSNLRD
     LGHREEAIKV YRIALELDPG IDFARENIDR LEADLARERA AGQS
//

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