(data stored in SCRATCH zone)

SWISSPROT: A0LFC3_SYNFM

ID   A0LFC3_SYNFM            Unreviewed;       171 AA.
AC   A0LFC3;
DT   12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT   12-DEC-2006, sequence version 1.
DT   08-MAY-2019, entry version 79.
DE   RecName: Full=Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646};
GN   Name=infC {ECO:0000256|HAMAP-Rule:MF_00080};
GN   OrderedLocusNames=Sfum_0425 {ECO:0000313|EMBL:ABK16125.1};
OS   Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).
OC   Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales;
OC   Syntrophobacteraceae; Syntrophobacter.
OX   NCBI_TaxID=335543 {ECO:0000313|EMBL:ABK16125.1, ECO:0000313|Proteomes:UP000001784};
RN   [1] {ECO:0000313|EMBL:ABK16125.1, ECO:0000313|Proteomes:UP000001784}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 10017 / MPOB {ECO:0000313|Proteomes:UP000001784};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E.G.,
RA   Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Kim E., Boone D.R., Brockman F., Culley D., Ferry J., Gunsalus R.,
RA   McInerney M.J., Morrison M., Plugge C., Rohlin L., Scholten J.,
RA   Sieber J., Stams A.J.M., Worm P., Henstra A.M., Richardson P.;
RT   "Complete sequence of Syntrophobacter fumaroxidans MPOB.";
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: IF-3 binds to the 30S ribosomal subunit and shifts the
CC       equilibrum between 70S ribosomes and their 50S and 30S subunits in
CC       favor of the free subunits, thus enhancing the availability of 30S
CC       subunits on which protein synthesis initiation begins.
CC       {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646,
CC       ECO:0000256|SAAS:SAAS00024292}.
CC   -!- SUBUNIT: Monomer. {ECO:0000256|HAMAP-Rule:MF_00080,
CC       ECO:0000256|RuleBase:RU000646, ECO:0000256|SAAS:SAAS00024306}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00080,
CC       ECO:0000256|RuleBase:RU000646}.
CC   -!- SIMILARITY: Belongs to the IF-3 family. {ECO:0000256|HAMAP-
CC       Rule:MF_00080, ECO:0000256|RuleBase:RU000646,
CC       ECO:0000256|SAAS:SAAS00816089}.
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DR   EMBL; CP000478; ABK16125.1; -; Genomic_DNA.
DR   STRING; 335543.Sfum_0425; -.
DR   EnsemblBacteria; ABK16125; ABK16125; Sfum_0425.
DR   KEGG; sfu:Sfum_0425; -.
DR   eggNOG; ENOG4108UUX; Bacteria.
DR   eggNOG; COG0290; LUCA.
DR   HOGENOM; HOG000035157; -.
DR   KO; K02520; -.
DR   OMA; GRNMIMF; -.
DR   BioCyc; SFUM335543:G1G7I-433-MONOMER; -.
DR   Proteomes; UP000001784; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.10.20.80; -; 1.
DR   Gene3D; 3.30.110.10; -; 1.
DR   HAMAP; MF_00080; IF_3; 1.
DR   InterPro; IPR036788; T_IF-3_C_sf.
DR   InterPro; IPR036787; T_IF-3_N_sf.
DR   InterPro; IPR019813; Translation_initiation_fac3_CS.
DR   InterPro; IPR001288; Translation_initiation_fac_3.
DR   InterPro; IPR019815; Translation_initiation_fac_3_C.
DR   InterPro; IPR019814; Translation_initiation_fac_3_N.
DR   PANTHER; PTHR10938; PTHR10938; 1.
DR   Pfam; PF00707; IF3_C; 1.
DR   Pfam; PF05198; IF3_N; 1.
DR   SUPFAM; SSF54364; SSF54364; 1.
DR   SUPFAM; SSF55200; SSF55200; 1.
DR   TIGRFAMs; TIGR00168; infC; 1.
DR   PROSITE; PS00938; IF3; 1.
PE   3: Inferred from homology;
DR   PRODOM; A0LFC3.
DR   SWISS-2DPAGE; A0LFC3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001784};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00080};
KW   Initiation factor {ECO:0000256|HAMAP-Rule:MF_00080,
KW   ECO:0000256|RuleBase:RU000646, ECO:0000256|SAAS:SAAS00122292,
KW   ECO:0000313|EMBL:ABK16125.1};
KW   Protein biosynthesis {ECO:0000256|HAMAP-Rule:MF_00080,
KW   ECO:0000256|RuleBase:RU000646, ECO:0000256|SAAS:SAAS00122285};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001784}.
FT   DOMAIN        9     78       IF3_N. {ECO:0000259|Pfam:PF05198}.
FT   DOMAIN       85    170       IF3_C. {ECO:0000259|Pfam:PF00707}.
SQ   SEQUENCE   171 AA;  19642 MW;  A17502732E35BE6B CRC64;
     MVLDKQVNVN ERIRSSEVRV IGQDGQQLGV LSLKKALELA AQDELDLVEV APNADPPVCK
     IMDYGKFKYQ QNKRTQEAKK KQTVIQVKEV KIRPKTDEHD LLVKIRHIKR FLAQKDKAKV
     TILFRGREIA YTDQGTKVLE RVREELKEDA VIEQPPKMEG RNMVMILAPK A
//

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