(data stored in SCRATCH zone)

SWISSPROT: A0LFR7_SYNFM

ID   A0LFR7_SYNFM            Unreviewed;       508 AA.
AC   A0LFR7;
DT   12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT   12-DEC-2006, sequence version 1.
DT   08-MAY-2019, entry version 94.
DE   SubName: Full=Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:ABK16269.1};
GN   OrderedLocusNames=Sfum_0570 {ECO:0000313|EMBL:ABK16269.1};
OS   Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).
OC   Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales;
OC   Syntrophobacteraceae; Syntrophobacter.
OX   NCBI_TaxID=335543 {ECO:0000313|EMBL:ABK16269.1, ECO:0000313|Proteomes:UP000001784};
RN   [1] {ECO:0000313|EMBL:ABK16269.1, ECO:0000313|Proteomes:UP000001784}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 10017 / MPOB {ECO:0000313|Proteomes:UP000001784};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E.G.,
RA   Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Kim E., Boone D.R., Brockman F., Culley D., Ferry J., Gunsalus R.,
RA   McInerney M.J., Morrison M., Plugge C., Rohlin L., Scholten J.,
RA   Sieber J., Stams A.J.M., Worm P., Henstra A.M., Richardson P.;
RT   "Complete sequence of Syntrophobacter fumaroxidans MPOB.";
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000478; ABK16269.1; -; Genomic_DNA.
DR   RefSeq; WP_011697442.1; NC_008554.1.
DR   STRING; 335543.Sfum_0570; -.
DR   EnsemblBacteria; ABK16269; ABK16269; Sfum_0570.
DR   KEGG; sfu:Sfum_0570; -.
DR   eggNOG; ENOG4108JUA; Bacteria.
DR   eggNOG; COG3604; LUCA.
DR   HOGENOM; HOG000058487; -.
DR   KO; K02584; -.
DR   OMA; RIIATMV; -.
DR   OrthoDB; 123059at2; -.
DR   BioCyc; SFUM335543:G1G7I-585-MONOMER; -.
DR   Proteomes; UP000001784; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0008134; F:transcription factor binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   Gene3D; 3.30.450.40; -; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003018; GAF.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   Pfam; PF01590; GAF; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00065; GAF; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
DR   PRODOM; A0LFR7.
DR   SWISS-2DPAGE; A0LFR7.
KW   ATP-binding {ECO:0000256|SAAS:SAAS00473007};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001784};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00814512};
KW   Nucleotide-binding {ECO:0000256|SAAS:SAAS00473126};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001784};
KW   Transcription {ECO:0000256|SAAS:SAAS00814760};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00814754}.
FT   DOMAIN      191    420       Sigma-54 factor interaction.
FT                                {ECO:0000259|PROSITE:PS50045}.
FT   COILED      137    157       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   508 AA;  56755 MW;  C76A710A50F4B276 CRC64;
     MSENYNLEEL RTLHEIARVV SRSAELKDQL QQTLDILSSR LGMERGMVSV LDLQTGEAWL
     DVARGVDVER GTIRYRPGEG ITGKVAQSGR PMGIANLGDE ALFLDRTGAR RSLNREELAF
     LCVPIFYQGR SVGVLSADKL ARRVEDLDKE VEILSAVAEL LGKVVHFRAV EEENSRLRRM
     LAEARRPTTN IIGRSKVIQE VLRAIDQVAD TNTTVLISGE TGTGKELVAR AIHDNSRRAK
     GPLVQVNCAA MPDTLLESEL FGHEKGAFTG AVTRRRGRFE EAQGGTIFLD EVGELSPIAQ
     AKLLRVLQER EFQPLGSSRT VKVDVRVITA SNKDLEKEVA LGTFRSDLYY RLNVFPIFLP
     PLRERGPDIL LLADYFVLKY ARELDKDVKR ITTSAIDMLM CYHWPGNVRE LENCIERAVL
     LAGGNAVDSW HLPPTLQMKP VGMQNVSRGK LEALVSAFER DLITDALKDV RGNQSQAARL
     LGTTKRIVQY KVEKYGIDPR RFRVKAPA
//

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