(data stored in SCRATCH zone)

SWISSPROT: A1AYA3_PARDP

ID   A1AYA3_PARDP            Unreviewed;        78 AA.
AC   A1AYA3;
DT   23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT   23-JAN-2007, sequence version 1.
DT   08-MAY-2019, entry version 80.
DE   SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABL68247.1};
GN   OrderedLocusNames=Pden_0130 {ECO:0000313|EMBL:ABL68247.1}, Pden_3368
GN   {ECO:0000313|EMBL:ABL71441.1};
OS   Paracoccus denitrificans (strain Pd 1222).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Paracoccus.
OX   NCBI_TaxID=318586 {ECO:0000313|EMBL:ABL68247.1, ECO:0000313|Proteomes:UP000000361};
RN   [1] {ECO:0000313|EMBL:ABL68247.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=PD1222 {ECO:0000313|EMBL:ABL68247.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R.,
RA   Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J.,
RA   van Spanning R.J.M., Richardson P.;
RT   "Complete sequence of Chromosome 1 of Paracoccus denitrificans
RT   PD1222.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000000361}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pd 1222 {ECO:0000313|Proteomes:UP000000361};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R.,
RA   Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J.,
RA   van Spanning R.J.M., Richardson P.;
RT   "Complete sequence of chromosome 1 of Paracoccus denitrificans
RT   PD1222.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:ABL71441.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=PD1222 {ECO:0000313|EMBL:ABL71441.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R.,
RA   Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J.,
RA   van Spanning R.J.M., Richardson P.;
RT   "Complete sequence of Chromosome 2 of Paracoccus denitrificans
RT   PD1222.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|Proteomes:UP000000361}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pd 1222 {ECO:0000313|Proteomes:UP000000361};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R.,
RA   Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J.,
RA   van Spanning R.J.M., Richardson P.;
RT   "Complete sequence of chromosome 2 of Paracoccus denitrificans
RT   PD1222.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000489; ABL68247.1; -; Genomic_DNA.
DR   EMBL; CP000490; ABL71441.1; -; Genomic_DNA.
DR   STRING; 318586.Pden_3368; -.
DR   PRIDE; A1AYA3; -.
DR   EnsemblBacteria; ABL68247; ABL68247; Pden_0130.
DR   EnsemblBacteria; ABL71441; ABL71441; Pden_3368.
DR   KEGG; pde:Pden_0130; -.
DR   KEGG; pde:Pden_3368; -.
DR   eggNOG; ENOG41084JM; Bacteria.
DR   eggNOG; ENOG410ZXVG; LUCA.
DR   HOGENOM; HOG000225390; -.
DR   OMA; DINRNYV; -.
DR   Proteomes; UP000000361; Chromosome 1.
DR   Proteomes; UP000000361; Chromosome 2.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   Pfam; PF01381; HTH_3; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; SSF47413; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
DR   PRODOM; A1AYA3.
DR   SWISS-2DPAGE; A1AYA3.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000361};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000361}.
FT   DOMAIN       18     72       HTH cro/C1-type. {ECO:0000259|PROSITE:
FT                                PS50943}.
FT   COILED       11     31       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   78 AA;  9039 MW;  68461A540B9FFDD4 CRC64;
     MPGDSSGMRL RERVARNLRR LRQEKSLSQE ELADRADINR NYVGMLEREE NAATVDMLEK
     LAAVLEVDPV ELLRRDKD
//

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