(data stored in SCRATCH zone)

SWISSPROT: A1AZ16_PARDP

ID   A1AZ16_PARDP            Unreviewed;       420 AA.
AC   A1AZ16;
DT   23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT   23-JAN-2007, sequence version 1.
DT   08-MAY-2019, entry version 80.
DE   SubName: Full=MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ABL68510.1};
GN   OrderedLocusNames=Pden_0396 {ECO:0000313|EMBL:ABL68510.1};
OS   Paracoccus denitrificans (strain Pd 1222).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Paracoccus.
OX   NCBI_TaxID=318586 {ECO:0000313|EMBL:ABL68510.1, ECO:0000313|Proteomes:UP000000361};
RN   [1] {ECO:0000313|Proteomes:UP000000361}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pd 1222 {ECO:0000313|Proteomes:UP000000361};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R.,
RA   Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J.,
RA   van Spanning R.J.M., Richardson P.;
RT   "Complete sequence of chromosome 1 of Paracoccus denitrificans
RT   PD1222.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000489; ABL68510.1; -; Genomic_DNA.
DR   STRING; 318586.Pden_0396; -.
DR   PRIDE; A1AZ16; -.
DR   EnsemblBacteria; ABL68510; ABL68510; Pden_0396.
DR   KEGG; pde:Pden_0396; -.
DR   eggNOG; ENOG4105CIW; Bacteria.
DR   eggNOG; COG0621; LUCA.
DR   HOGENOM; HOG000224765; -.
DR   KO; K18707; -.
DR   OMA; HFHIPLQ; -.
DR   Proteomes; UP000000361; Chromosome 1.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
DR   GO; GO:0016740; F:transferase activity; IEA:InterPro.
DR   GO; GO:0006400; P:tRNA modification; IEA:InterPro.
DR   Gene3D; 3.40.50.12160; -; 1.
DR   Gene3D; 3.80.30.20; -; 1.
DR   InterPro; IPR006638; Elp3/MiaB/NifB.
DR   InterPro; IPR005839; Methylthiotransferase.
DR   InterPro; IPR020612; Methylthiotransferase_CS.
DR   InterPro; IPR013848; Methylthiotransferase_N.
DR   InterPro; IPR038135; Methylthiotransferase_N_sf.
DR   InterPro; IPR006467; MiaB-like_C.
DR   InterPro; IPR007197; rSAM.
DR   InterPro; IPR023404; rSAM_horseshoe.
DR   Pfam; PF04055; Radical_SAM; 1.
DR   Pfam; PF00919; UPF0004; 1.
DR   SFLD; SFLDS00029; Radical_SAM; 1.
DR   SMART; SM00729; Elp3; 1.
DR   TIGRFAMs; TIGR01579; MiaB-like-C; 1.
DR   TIGRFAMs; TIGR00089; TIGR00089; 1.
DR   PROSITE; PS51449; MTTASE_N; 1.
DR   PROSITE; PS01278; MTTASE_RADICAL; 1.
PE   4: Predicted;
DR   PRODOM; A1AZ16.
DR   SWISS-2DPAGE; A1AZ16.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000361};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000361}.
FT   DOMAIN        5    117       MTTase N-terminal. {ECO:0000259|PROSITE:
FT                                PS51449}.
FT   COILED       42     62       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   420 AA;  46201 MW;  58C9618ABA9F4B7D CRC64;
     MKDLKPPVFA TLGCRLNAYE TEAMREMAEA AGLQGAVIVN TCAVTAEAVR KARQEIRRLA
     RENPGAPVIV TGCAAQTEPE TFAAMAEVSR VIGNHEKMQP ATWAAMQAPD LIGETEKVQV
     DDIMSVKETA GHLIDGFGRH RAYVQVQNGC DHRCTFCIIP YGRGNSRSVP AGVVVDQIKR
     LRDRGFNEVV LTGVDLTSWG ADLPGQPRLG DLVMRILRLV PDLPRLRISS IDSIEADENL
     MLAIATEPRL MPHLHLSLQA GDDMILKRMK RRHLRDDAIR FCEEARRLRP GIAFGADIIA
     GFPTETEAMF ENSLKLVEDC GLTFLHVFPY SARKGTPAAR MPRVPGPAIK ERAARLRAAG
     DAALARHLQA QLGEARMVLT EGPRLGRTEH FTEVAFDRDM PEGTLMALRI AGHDGQRLTV
//

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