(data stored in SCRATCH zone)

SWISSPROT: A1AZ32_PARDP

ID   A1AZ32_PARDP            Unreviewed;       514 AA.
AC   A1AZ32;
DT   23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT   23-JAN-2007, sequence version 1.
DT   08-MAY-2019, entry version 80.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ABL68526.1};
GN   OrderedLocusNames=Pden_0412 {ECO:0000313|EMBL:ABL68526.1};
OS   Paracoccus denitrificans (strain Pd 1222).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Paracoccus.
OX   NCBI_TaxID=318586 {ECO:0000313|EMBL:ABL68526.1, ECO:0000313|Proteomes:UP000000361};
RN   [1] {ECO:0000313|Proteomes:UP000000361}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pd 1222 {ECO:0000313|Proteomes:UP000000361};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R.,
RA   Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J.,
RA   van Spanning R.J.M., Richardson P.;
RT   "Complete sequence of chromosome 1 of Paracoccus denitrificans
RT   PD1222.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000489; ABL68526.1; -; Genomic_DNA.
DR   RefSeq; WP_011746759.1; NC_008686.1.
DR   STRING; 318586.Pden_0412; -.
DR   PRIDE; A1AZ32; -.
DR   EnsemblBacteria; ABL68526; ABL68526; Pden_0412.
DR   KEGG; pde:Pden_0412; -.
DR   eggNOG; ENOG4107QIM; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   HOGENOM; HOG000036007; -.
DR   KO; K10747; -.
DR   OMA; WLFEESY; -.
DR   BioCyc; PDEN318586:G1GW1-412-MONOMER; -.
DR   Proteomes; UP000000361; Chromosome 1.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   InterPro; IPR026333; ATP_dep_DNA_lig_pp_1105_fam.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR   InterPro; IPR012308; DNA_ligase_ATP-dep_N.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF04675; DNA_ligase_A_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR04120; DNA_lig_bact; 1.
DR   PROSITE; PS00697; DNA_LIGASE_A1; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
DR   PRODOM; A1AZ32.
DR   SWISS-2DPAGE; A1AZ32.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000361};
KW   Ligase {ECO:0000313|EMBL:ABL68526.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000361}.
FT   DOMAIN      304    422       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   514 AA;  56550 MW;  AF98C5DA5ADFC8EA CRC64;
     MKAFAALLER LAFTPARNAK LQLLQHYLER TPDPDRGWAL AALTGDLELR RVTPSLLRGL
     AAERVDGELL ALSYDFVGDL AETIALLWPE GAEDDPSLSQ AVALLQGTGK AALPGAIAGM
     LDRLGPSERL AFLKLATGNL RIGVSARMAR TALAGMGVPS VPEIEEIWHG LAPPYAPLFG
     WLGGGARPES AALAPFRPVM LSTPTDLDEL RALDPGDYLA EWKWDGIRVQ AVSEGGMRRL
     YSRTGEDISH AFPDVIEAMD FDGTADGELI VRREGEVAPF GDLQKRLNRK TVGKGLLASH
     PAGLRLYDLL LWDGRDLRAE PLGARRTVLE AVDFGPRIDI SPLLDFATWE DLAALRAEPP
     AAVIEGVMIK RRDSAYVAGR PRGPWFKWKR DPMVVDAVLI YAQRGHGKRS GFHSDFTFGL
     WDGGELVPVG KAYFGFTDAE LRELDRFVRQ NTVERYGPVR ALAPKLVVEV AFEGLNRSTR
     HRSGVAMRFP RISRIRWDKP AAEADRLETL EAML
//

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