(data stored in SCRATCH zone)

SWISSPROT: A1SCT2_NOCSJ

ID   A1SCT2_NOCSJ            Unreviewed;       155 AA.
AC   A1SCT2;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   08-MAY-2019, entry version 78.
DE   SubName: Full=Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABL79617.1};
GN   OrderedLocusNames=Noca_0071 {ECO:0000313|EMBL:ABL79617.1};
OS   Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC   Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae;
OC   Nocardioides.
OX   NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL79617.1, ECO:0000313|Proteomes:UP000000640};
RN   [1] {ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA   Mattes T., Gossett J., Richardson P.;
RT   "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABL79617.1, ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX   PubMed=21551312; DOI=10.1128/JB.05109-11;
RA   Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C.,
RA   Copeland A., Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A.,
RA   Hammon N.M., Han S., Hauser L.J., Israni S., Kim E., Kyrpides N.,
RA   Land M.L., Lapidus A., Larimer F.W., Lucas S., Pitluck S.,
RA   Richardson P., Schmutz J., Tapia R., Thompson S., Tice H.N.,
RA   Spain J.C., Gossett J.G., Mattes T.E.;
RT   "Genome Sequence of the ethene- and vinyl chloride-oxidizing
RT   actinomycete Nocardioides sp. strain JS614.";
RL   J. Bacteriol. 193:3399-3400(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000509; ABL79617.1; -; Genomic_DNA.
DR   RefSeq; WP_011753568.1; NC_008699.1.
DR   STRING; 196162.Noca_0071; -.
DR   EnsemblBacteria; ABL79617; ABL79617; Noca_0071.
DR   KEGG; nca:Noca_0071; -.
DR   eggNOG; ENOG4105EW9; Bacteria.
DR   eggNOG; COG1522; LUCA.
DR   HOGENOM; HOG000115327; -.
DR   OMA; TAFILME; -.
DR   OrthoDB; 1534467at2; -.
DR   BioCyc; NSP196162:GH4V-71-MONOMER; -.
DR   Proteomes; UP000000640; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00090; HTH_ARSR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011991; ArsR-like_HTH.
DR   InterPro; IPR000485; AsnC-type_HTH_dom.
DR   InterPro; IPR011008; Dimeric_a/b-barrel.
DR   InterPro; IPR019888; Tscrpt_reg_AsnC-typ.
DR   InterPro; IPR019887; Tscrpt_reg_AsnC/Lrp_C.
DR   InterPro; IPR019885; Tscrpt_reg_HTH_AsnC-type_CS.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF01037; AsnC_trans_reg; 1.
DR   PRINTS; PR00033; HTHASNC.
DR   SMART; SM00344; HTH_ASNC; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF54909; SSF54909; 1.
DR   PROSITE; PS00519; HTH_ASNC_1; 1.
DR   PROSITE; PS50956; HTH_ASNC_2; 1.
PE   4: Predicted;
DR   PRODOM; A1SCT2.
DR   SWISS-2DPAGE; A1SCT2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000640};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000640}.
FT   DOMAIN        1     64       HTH asnC-type. {ECO:0000259|PROSITE:
FT                                PS50956}.
SQ   SEQUENCE   155 AA;  17451 MW;  1CCAD06A3DF16415 CRC64;
     MDSLDRAIID HLRRNAHLTN TELAELVGLT PSPCLRRVRR LENEGIILGY HAHIAPVALH
     RGFEVHVDLE LADQTKQTIR VFEAALIAYD EVVEARRMFG APDYQALVAV TDLPAYEHFL
     TEHLTALPGL GRLQSRFPMK TIKTDTPSTP PTTRH
//

If you have problems or comments...

PBIL Back to PBIL home page