(data stored in SCRATCH zone)

SWISSPROT: A1SDM4_NOCSJ

ID   A1SDM4_NOCSJ            Unreviewed;       240 AA.
AC   A1SDM4;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   16-JAN-2019, entry version 49.
DE   SubName: Full=Type II secretion system protein {ECO:0000313|EMBL:ABL79909.1};
GN   OrderedLocusNames=Noca_0366 {ECO:0000313|EMBL:ABL79909.1};
OS   Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC   Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae;
OC   Nocardioides.
OX   NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL79909.1, ECO:0000313|Proteomes:UP000000640};
RN   [1] {ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA   Mattes T., Gossett J., Richardson P.;
RT   "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABL79909.1, ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX   PubMed=21551312; DOI=10.1128/JB.05109-11;
RA   Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C.,
RA   Copeland A., Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A.,
RA   Hammon N.M., Han S., Hauser L.J., Israni S., Kim E., Kyrpides N.,
RA   Land M.L., Lapidus A., Larimer F.W., Lucas S., Pitluck S.,
RA   Richardson P., Schmutz J., Tapia R., Thompson S., Tice H.N.,
RA   Spain J.C., Gossett J.G., Mattes T.E.;
RT   "Genome Sequence of the ethene- and vinyl chloride-oxidizing
RT   actinomycete Nocardioides sp. strain JS614.";
RL   J. Bacteriol. 193:3399-3400(2011).
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DR   EMBL; CP000509; ABL79909.1; -; Genomic_DNA.
DR   RefSeq; WP_011753860.1; NC_008699.1.
DR   STRING; 196162.Noca_0366; -.
DR   EnsemblBacteria; ABL79909; ABL79909; Noca_0366.
DR   KEGG; nca:Noca_0366; -.
DR   HOGENOM; HOG000052406; -.
DR   OMA; FLPAFVC; -.
DR   OrthoDB; 2079512at2; -.
DR   BioCyc; NSP196162:GH4V-370-MONOMER; -.
DR   Proteomes; UP000000640; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR018076; T2SS_F.
DR   Pfam; PF00482; T2SSF; 1.
PE   4: Predicted;
DR   PRODOM; A1SDM4.
DR   SWISS-2DPAGE; A1SDM4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000640};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000640};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL        1     30       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        31    240       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5002636706.
FT   TRANSMEM     53     82       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    211    236       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      105    226       T2SSF. {ECO:0000259|Pfam:PF00482}.
SQ   SEQUENCE   240 AA;  24331 MW;  D11D4F819A68041C CRC64;
     MSALPALLPV LAAAMAAALL LPPRPTLPGA RSPSDHAPSP GWLHRHRLLW SGLAGTGALV
     LVGGPAGPPA ALVAAVAAWT VIGRAEPPDV RRRREAVRRD LPHVVDLFAA TLRGGAAPAD
     GIALVCTALP GPAADRLAGV AARLALGLDP GQVWSALADD PHLGRLGRTL ARAHSSGAPV
     VAAVERLADD LARSARAETE ERARAVGVKA ALPLGLCLLP AFVLIGIVPL VVALLASLDI
//

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