(data stored in SCRATCH zone)

SWISSPROT: A1SDY4_NOCSJ

ID   A1SDY4_NOCSJ            Unreviewed;       202 AA.
AC   A1SDY4;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   08-MAY-2019, entry version 74.
DE   SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABL80019.1};
GN   OrderedLocusNames=Noca_0477 {ECO:0000313|EMBL:ABL80019.1};
OS   Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC   Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae;
OC   Nocardioides.
OX   NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL80019.1, ECO:0000313|Proteomes:UP000000640};
RN   [1] {ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA   Mattes T., Gossett J., Richardson P.;
RT   "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABL80019.1, ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX   PubMed=21551312; DOI=10.1128/JB.05109-11;
RA   Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C.,
RA   Copeland A., Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A.,
RA   Hammon N.M., Han S., Hauser L.J., Israni S., Kim E., Kyrpides N.,
RA   Land M.L., Lapidus A., Larimer F.W., Lucas S., Pitluck S.,
RA   Richardson P., Schmutz J., Tapia R., Thompson S., Tice H.N.,
RA   Spain J.C., Gossett J.G., Mattes T.E.;
RT   "Genome Sequence of the ethene- and vinyl chloride-oxidizing
RT   actinomycete Nocardioides sp. strain JS614.";
RL   J. Bacteriol. 193:3399-3400(2011).
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DR   EMBL; CP000509; ABL80019.1; -; Genomic_DNA.
DR   RefSeq; WP_011753970.1; NC_008699.1.
DR   STRING; 196162.Noca_0477; -.
DR   EnsemblBacteria; ABL80019; ABL80019; Noca_0477.
DR   KEGG; nca:Noca_0477; -.
DR   eggNOG; ENOG4108ZNU; Bacteria.
DR   eggNOG; ENOG4111QBX; LUCA.
DR   HOGENOM; HOG000021524; -.
DR   OMA; IPIDPMQ; -.
DR   OrthoDB; 2089619at2; -.
DR   BioCyc; NSP196162:GH4V-481-MONOMER; -.
DR   Proteomes; UP000000640; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001647; HTH_TetR.
DR   InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR   InterPro; IPR041678; TetR_C_16.
DR   Pfam; PF17920; TetR_C_16; 1.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF48498; SSF48498; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
DR   PRODOM; A1SDY4.
DR   SWISS-2DPAGE; A1SDY4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000640};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335,
KW   ECO:0000256|SAAS:SAAS00132209};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000640};
KW   Transcription {ECO:0000256|SAAS:SAAS00131596};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00132066}.
FT   DOMAIN       19     79       HTH tetR-type. {ECO:0000259|PROSITE:
FT                                PS50977}.
FT   DNA_BIND     42     61       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00335}.
SQ   SEQUENCE   202 AA;  21680 MW;  F1BE21551BF9418D CRC64;
     MTDPATRAAP RRGRRPGTPD TRAAILAAAR ELFAAQGYAG TSVRAIGAAA GVDASLVHHY
     FGTKDDLFVA ALELRVDPRV VVPPVFEGGL ESAGERLMRL FVSVWDDEEK RLPLLALIRG
     ALDSGGQQLV RDGFMRMVLE PLAAGLGVAD QRRMPLVASQ LLGLVLLRYL LVVEPLASMP
     ADELVALYGP TLQRYLSGPL PD
//

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