(data stored in SCRATCH zone)

SWISSPROT: A1SDY6_NOCSJ

ID   A1SDY6_NOCSJ            Unreviewed;       245 AA.
AC   A1SDY6;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   16-JAN-2019, entry version 58.
DE   RecName: Full=Transport permease protein {ECO:0000256|RuleBase:RU361157};
GN   OrderedLocusNames=Noca_0479 {ECO:0000313|EMBL:ABL80021.1};
OS   Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC   Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae;
OC   Nocardioides.
OX   NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL80021.1, ECO:0000313|Proteomes:UP000000640};
RN   [1] {ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA   Mattes T., Gossett J., Richardson P.;
RT   "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABL80021.1, ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX   PubMed=21551312; DOI=10.1128/JB.05109-11;
RA   Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C.,
RA   Copeland A., Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A.,
RA   Hammon N.M., Han S., Hauser L.J., Israni S., Kim E., Kyrpides N.,
RA   Land M.L., Lapidus A., Larimer F.W., Lucas S., Pitluck S.,
RA   Richardson P., Schmutz J., Tapia R., Thompson S., Tice H.N.,
RA   Spain J.C., Gossett J.G., Mattes T.E.;
RT   "Genome Sequence of the ethene- and vinyl chloride-oxidizing
RT   actinomycete Nocardioides sp. strain JS614.";
RL   J. Bacteriol. 193:3399-3400(2011).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU361157}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU361157}.
CC   -!- SIMILARITY: Belongs to the ABC-2 integral membrane protein family.
CC       {ECO:0000256|RuleBase:RU361157}.
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DR   EMBL; CP000509; ABL80021.1; -; Genomic_DNA.
DR   RefSeq; WP_011753972.1; NC_008699.1.
DR   STRING; 196162.Noca_0479; -.
DR   EnsemblBacteria; ABL80021; ABL80021; Noca_0479.
DR   KEGG; nca:Noca_0479; -.
DR   eggNOG; ENOG4107Y2R; Bacteria.
DR   eggNOG; COG0842; LUCA.
DR   HOGENOM; HOG000021525; -.
DR   KO; K01992; -.
DR   OMA; AVQFMPA; -.
DR   OrthoDB; 1552415at2; -.
DR   BioCyc; NSP196162:GH4V-483-MONOMER; -.
DR   Proteomes; UP000000640; Chromosome.
DR   GO; GO:0043190; C:ATP-binding cassette (ABC) transporter complex; IEA:UniProtKB-UniRule.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   InterPro; IPR013525; ABC_2_trans.
DR   InterPro; IPR000412; ABC_2_transport.
DR   Pfam; PF01061; ABC2_membrane; 1.
DR   PIRSF; PIRSF006648; DrrB; 1.
DR   PROSITE; PS51012; ABC_TM2; 1.
PE   3: Inferred from homology;
DR   PRODOM; A1SDY6.
DR   SWISS-2DPAGE; A1SDY6.
KW   Cell membrane {ECO:0000256|RuleBase:RU361157};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000640};
KW   Membrane {ECO:0000256|RuleBase:RU361157};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000640};
KW   Transmembrane {ECO:0000256|PROSITE-ProRule:PRU00442,
KW   ECO:0000256|RuleBase:RU361157};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU361157};
KW   Transport {ECO:0000256|RuleBase:RU361157}.
FT   TRANSMEM     24     42       Helical. {ECO:0000256|RuleBase:RU361157}.
FT   TRANSMEM     54     75       Helical. {ECO:0000256|RuleBase:RU361157}.
FT   TRANSMEM     96    120       Helical. {ECO:0000256|RuleBase:RU361157}.
FT   TRANSMEM    132    155       Helical. {ECO:0000256|RuleBase:RU361157}.
FT   TRANSMEM    162    181       Helical. {ECO:0000256|RuleBase:RU361157}.
FT   TRANSMEM    222    240       Helical. {ECO:0000256|RuleBase:RU361157}.
FT   DOMAIN        8    208       ABC2_membrane. {ECO:0000259|Pfam:
FT                                PF01061}.
SQ   SEQUENCE   245 AA;  26452 MW;  6D84B963BA51A55B CRC64;
     MNARITLAVA GRVLIQLRRD HRTLAMLLVL PCLLISLMWW MYDEANPLLF DRIGPALLAM
     FPVIVMFLVT SVTTLRERSS GTLERLLAMP MGKLDFLVGY AIAFGLVAAV QSVLAVAVSI
     GLLDLDLEGP VWLLTVVAVV DAVLGSALGL FVSAFAQTEF QAVQFMPAIV IPQLLLCGLL
     VPRELLPDVL RQLSDVLPLS YAVDAMQHLT TSSATGQVWR DVAIVGAFAV AGLAFGAATL
     RRRTP
//

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