(data stored in SCRATCH zone)

SWISSPROT: A1SE39_NOCSJ

ID   A1SE39_NOCSJ            Unreviewed;       509 AA.
AC   A1SE39;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   16-JAN-2019, entry version 72.
DE   SubName: Full=NADH dehydrogenase subunit M {ECO:0000313|EMBL:ABL80074.1};
DE            EC=1.6.5.3 {ECO:0000313|EMBL:ABL80074.1};
GN   OrderedLocusNames=Noca_0532 {ECO:0000313|EMBL:ABL80074.1};
OS   Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC   Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae;
OC   Nocardioides.
OX   NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL80074.1, ECO:0000313|Proteomes:UP000000640};
RN   [1] {ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA   Mattes T., Gossett J., Richardson P.;
RT   "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABL80074.1, ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX   PubMed=21551312; DOI=10.1128/JB.05109-11;
RA   Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C.,
RA   Copeland A., Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A.,
RA   Hammon N.M., Han S., Hauser L.J., Israni S., Kim E., Kyrpides N.,
RA   Land M.L., Lapidus A., Larimer F.W., Lucas S., Pitluck S.,
RA   Richardson P., Schmutz J., Tapia R., Thompson S., Tice H.N.,
RA   Spain J.C., Gossett J.G., Mattes T.E.;
RT   "Genome Sequence of the ethene- and vinyl chloride-oxidizing
RT   actinomycete Nocardioides sp. strain JS614.";
RL   J. Bacteriol. 193:3399-3400(2011).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU000320};
CC       Multi-pass membrane protein {ECO:0000256|RuleBase:RU000320}.
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DR   EMBL; CP000509; ABL80074.1; -; Genomic_DNA.
DR   RefSeq; WP_011754024.1; NC_008699.1.
DR   STRING; 196162.Noca_0532; -.
DR   EnsemblBacteria; ABL80074; ABL80074; Noca_0532.
DR   KEGG; nca:Noca_0532; -.
DR   eggNOG; ENOG4105C8S; Bacteria.
DR   eggNOG; COG1008; LUCA.
DR   HOGENOM; HOG000100683; -.
DR   KO; K00342; -.
DR   OMA; ITRWGNQ; -.
DR   OrthoDB; 535707at2; -.
DR   BioCyc; NSP196162:GH4V-536-MONOMER; -.
DR   Proteomes; UP000000640; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008137; F:NADH dehydrogenase (ubiquinone) activity; IEA:UniProtKB-EC.
DR   GO; GO:0042773; P:ATP synthesis coupled electron transport; IEA:InterPro.
DR   InterPro; IPR010227; NADH_Q_OxRdtase_chainM/4.
DR   InterPro; IPR003918; NADH_UbQ_OxRdtase.
DR   InterPro; IPR001750; ND/Mrp_mem.
DR   PANTHER; PTHR43507; PTHR43507; 1.
DR   Pfam; PF00361; Proton_antipo_M; 1.
DR   PRINTS; PR01437; NUOXDRDTASE4.
DR   TIGRFAMs; TIGR01972; NDH_I_M; 1.
PE   4: Predicted;
DR   PRODOM; A1SE39.
DR   SWISS-2DPAGE; A1SE39.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000640};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Oxidoreductase {ECO:0000313|EMBL:ABL80074.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000640};
KW   Transmembrane {ECO:0000256|RuleBase:RU000320,
KW   ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM      6     24       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     36     55       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     75    101       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    113    130       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    136    156       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    168    189       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    215    238       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    250    272       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    278    300       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    307    328       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    334    356       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    376    398       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    410    433       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    456    477       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      132    424       Proton_antipo_M. {ECO:0000259|Pfam:
FT                                PF00361}.
SQ   SEQUENCE   509 AA;  54098 MW;  EB9838576BF9C255 CRC64;
     MNDLPWLTAL WVLPLVGALV TAFVPRATGS ALPKQVGLLF ALLTLAVGIA IAVQYDTGDG
     MQLTETHTWI EAFGVNYALG VDGLGLLLIL MTVALVPLVL VATWNDADDR SSAAFVAWAL
     ALESFSLAVF AATDVFLFYM VFEATLIPAY FLIGRFGQAG RGRAALKFLM YQLGGGLVLL
     ASVIGLYVVS ADAGNPSYLL SDLQQLDLST NTERWLFVGF MIAFAVKAPL FPLHTWLADT
     TEKATPGTSV LLVCILDKIG TFGMLRFGLG LFPEASQWAT PVVVALALVS IVYGALVAIG
     QDDILRLIGL TSLSHFGFIT LGIFAFSSQG GSGAILYMVN HGVGTAALFL IAGYLIRRKG
     TQLISQIAGV ETKAPLLAGL FLVAGLSTLG LPGLSQFVSE ILVLISAFDY HWWVGAIAVT
     GIVLAAIYVL WLYQRTMTGP ATPGDEAMTD LNRRELVAVV PLIAALVFFG FFPMPLLDVS
     NPTVDSLLQH VGVSDEAPTV ADHAEEGAH
//

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