(data stored in SCRATCH zone)

SWISSPROT: A1VJB2_POLNA

ID   A1VJB2_POLNA            Unreviewed;       345 AA.
AC   A1VJB2;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   11-DEC-2019, entry version 73.
DE   SubName: Full=ISXo7 transposase {ECO:0000313|EMBL:ABM35740.1};
GN   OrderedLocusNames=Pnap_0418 {ECO:0000313|EMBL:ABM35740.1}, Pnap_0871
GN   {ECO:0000313|EMBL:ABM36188.1}, Pnap_1393
GN   {ECO:0000313|EMBL:ABM36707.1};
OS   Polaromonas naphthalenivorans (strain CJ2).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Polaromonas.
OX   NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM35740.1, ECO:0000313|Proteomes:UP000000644};
RN   [1] {ECO:0000313|EMBL:ABM35740.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CJ2 {ECO:0000313|EMBL:ABM35740.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Madsen E.L.,
RA   Richardson P.;
RT   "Complete sequence of Chromosome1 of Polaromonas naphthalenivorans CJ2.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000000644}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX   PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA   Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT   "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT   tar-contaminated sediment, reveals physiological and metabolic versatility
RT   and evolution through extensive horizontal gene transfer.";
RL   Environ. Microbiol. 11:2253-2270(2009).
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DR   EMBL; CP000529; ABM35740.1; -; Genomic_DNA.
DR   EMBL; CP000529; ABM36188.1; -; Genomic_DNA.
DR   EMBL; CP000529; ABM36707.1; -; Genomic_DNA.
DR   RefSeq; WP_011799840.1; NC_008781.1.
DR   STRING; 365044.Pnap_1393; -.
DR   EnsemblBacteria; ABM35740; ABM35740; Pnap_0418.
DR   EnsemblBacteria; ABM36188; ABM36188; Pnap_0871.
DR   EnsemblBacteria; ABM36707; ABM36707; Pnap_1393.
DR   KEGG; pna:Pnap_0418; -.
DR   KEGG; pna:Pnap_0871; -.
DR   KEGG; pna:Pnap_1393; -.
DR   eggNOG; ENOG4108GQT; Bacteria.
DR   eggNOG; COG3335; LUCA.
DR   HOGENOM; HOG000081844; -.
DR   OMA; RTWHEET; -.
DR   OrthoDB; 1363223at2; -.
DR   BioCyc; PNAP365044:GJ8X-421-MONOMER; -.
DR   Proteomes; UP000000644; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR038717; Tc1-like_DDE_dom.
DR   InterPro; IPR025959; Winged_HTH_dom.
DR   Pfam; PF13358; DDE_3; 1.
DR   Pfam; PF13592; HTH_33; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
PE   4: Predicted;
DR   PRODOM; A1VJB2.
DR   SWISS-2DPAGE; A1VJB2.
KW   Reference proteome {ECO:0000313|Proteomes:UP000000644}.
FT   DOMAIN          98..156
FT                   /note="HTH_33"
FT                   /evidence="ECO:0000259|Pfam:PF13592"
FT   DOMAIN          172..313
FT                   /note="DDE_3"
FT                   /evidence="ECO:0000259|Pfam:PF13358"
SQ   SEQUENCE   345 AA;  39653 MW;  9F0520BD76993F52 CRC64;
     MEKENARKQT LEQLHERRKQ VVRLHKRAMG VMQIVSMTGL SYPAVRRCID LFDEGGWPAI
     RPALRGRTQG LGRTLSQAQE DSLQRSIIDQ RPEQLKMDFF LWSRAAVGQL IEQEYGIELQ
     VRSVGKYLAR WGFTPQKPIR RAYEQSPEAV QAWLEGEYPA IEQRARQEGA EIHWGDETAL
     VNTDVRGRSF APAGKTPVAR TVGGTRQKLS MIATVTNQGK TRWMIIDDAF DADKLIEFLR
     ALVKDAGKKV FLILDNLRVH HSKIVKAWVA NHRDEIELFY LPSYSPQLNP EERLNADLKQ
     EMGKRVPARS KAKLRDAANE HMALLERTPE RVIAYFQDRR VRYAA
//

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