(data stored in SCRATCH zone)

SWISSPROT: A1VJC1_POLNA

ID   A1VJC1_POLNA            Unreviewed;       346 AA.
AC   A1VJC1;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   11-DEC-2019, entry version 65.
DE   SubName: Full=Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ABM35749.1};
GN   OrderedLocusNames=Pnap_0427 {ECO:0000313|EMBL:ABM35749.1}, Pnap_1396
GN   {ECO:0000313|EMBL:ABM36710.1}, Pnap_1747
GN   {ECO:0000313|EMBL:ABM37057.1};
OS   Polaromonas naphthalenivorans (strain CJ2).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Polaromonas.
OX   NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM35749.1, ECO:0000313|Proteomes:UP000000644};
RN   [1] {ECO:0000313|EMBL:ABM35749.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CJ2 {ECO:0000313|EMBL:ABM35749.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Madsen E.L.,
RA   Richardson P.;
RT   "Complete sequence of Chromosome1 of Polaromonas naphthalenivorans CJ2.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000000644}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX   PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA   Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT   "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT   tar-contaminated sediment, reveals physiological and metabolic versatility
RT   and evolution through extensive horizontal gene transfer.";
RL   Environ. Microbiol. 11:2253-2270(2009).
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DR   EMBL; CP000529; ABM35749.1; -; Genomic_DNA.
DR   EMBL; CP000529; ABM36710.1; -; Genomic_DNA.
DR   EMBL; CP000529; ABM37057.1; -; Genomic_DNA.
DR   RefSeq; WP_011799849.1; NC_008781.1.
DR   EnsemblBacteria; ABM35749; ABM35749; Pnap_0427.
DR   EnsemblBacteria; ABM36710; ABM36710; Pnap_1396.
DR   EnsemblBacteria; ABM37057; ABM37057; Pnap_1747.
DR   KEGG; pna:Pnap_0427; -.
DR   KEGG; pna:Pnap_1396; -.
DR   KEGG; pna:Pnap_1747; -.
DR   eggNOG; ENOG4105EQR; Bacteria.
DR   eggNOG; COG3547; LUCA.
DR   HOGENOM; HOG000255700; -.
DR   OMA; FSRWART; -.
DR   OrthoDB; 655500at2; -.
DR   BioCyc; PNAP365044:GJ8X-430-MONOMER; -.
DR   Proteomes; UP000000644; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR   GO; GO:0006313; P:transposition, DNA-mediated; IEA:InterPro.
DR   InterPro; IPR003346; Transposase_20.
DR   InterPro; IPR002525; Transposase_N.
DR   Pfam; PF01548; DEDD_Tnp_IS110; 1.
DR   Pfam; PF02371; Transposase_20; 1.
PE   4: Predicted;
DR   PRODOM; A1VJC1.
DR   SWISS-2DPAGE; A1VJC1.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000644}.
FT   DOMAIN          10..150
FT                   /note="DEDD_Tnp_IS110"
FT                   /evidence="ECO:0000259|Pfam:PF01548"
FT   COILED          184..211
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   346 AA;  37995 MW;  326A012FE15B7451 CRC64;
     MKITAQLPVV GMDIAKNVFQ IHAVDPETGE IERIKLKRAK VAEFFANRQP CLVALEACGG
     AHHWGRTLAA QGHQVKLLPA RQVKAFVLRD KTDARDAQAI WVAAQQPHIH EVPVKSEPQQ
     ACLALHRMRA QLMKMRIMQT NALRGLLCEF GIVLPEGHRI LLQRIPGELA QAQDKLPGVL
     IESMQEQLSR IERLQQDIDH IDRRLAALGK QDQHMLALQA VPGIGPLTAT ALAATATDIS
     GFHSGRQFAA WLGLTPRQSG TGGKIRQLGI SKRGDPYVRT LLMHGARAII ARTQRTGWIT
     ALLARRPYSV VVAALANKLA RTAWAVLTKG KAFDQLRWNP AAAVAA
//

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