(data stored in SCRATCH zone)

SWISSPROT: A4AV85_MARSH

ID   A4AV85_MARSH            Unreviewed;       245 AA.
AC   A4AV85;
DT   03-APR-2007, integrated into UniProtKB/TrEMBL.
DT   03-APR-2007, sequence version 1.
DT   08-MAY-2019, entry version 77.
DE   RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};
DE            EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
GN   OrderedLocusNames=FB2170_00535 {ECO:0000313|EMBL:EAR00107.1};
OS   Maribacter sp. (strain HTCC2170 / KCCM 42371).
OC   Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Maribacter.
OX   NCBI_TaxID=313603 {ECO:0000313|EMBL:EAR00107.1, ECO:0000313|Proteomes:UP000001602};
RN   [1] {ECO:0000313|EMBL:EAR00107.1, ECO:0000313|Proteomes:UP000001602}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HTCC2170 / KCCM 42371 {ECO:0000313|Proteomes:UP000001602};
RX   PubMed=21037013; DOI=10.1128/JB.01207-10;
RA   Oh H.M., Kang I., Yang S.J., Jang Y., Vergin K.L., Giovannoni S.J.,
RA   Cho J.C.;
RT   "Complete genome sequence of strain HTCC2170, a novel member of the
RT   genus Maribacter in the family Flavobacteriaceae.";
RL   J. Bacteriol. 193:303-304(2011).
CC   -!- SIMILARITY: Belongs to the pseudouridine synthase RsuA family.
CC       {ECO:0000256|RuleBase:RU003887, ECO:0000256|SAAS:SAAS01169812}.
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DR   EMBL; CP002157; EAR00107.1; -; Genomic_DNA.
DR   RefSeq; WP_013304802.1; NC_014472.1.
DR   STRING; 313603.FB2170_00535; -.
DR   EnsemblBacteria; EAR00107; EAR00107; FB2170_00535.
DR   KEGG; fbc:FB2170_00535; -.
DR   eggNOG; ENOG4105FE9; Bacteria.
DR   eggNOG; COG1187; LUCA.
DR   HOGENOM; HOG000044954; -.
DR   KO; K06182; -.
DR   OMA; YHKPKGE; -.
DR   OrthoDB; 1037615at2; -.
DR   BioCyc; MSP313603:G1GNS-375-MONOMER; -.
DR   Proteomes; UP000001602; Chromosome.
DR   GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR   CDD; cd00165; S4; 1.
DR   Gene3D; 3.10.290.10; -; 1.
DR   Gene3D; 3.30.70.1560; -; 1.
DR   InterPro; IPR042092; PsdUridine_s_RsuA/RluB/E/F_cat.
DR   InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR   InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR   InterPro; IPR000748; PsdUridine_synth_RsuA/RluB/E/F.
DR   InterPro; IPR018496; PsdUridine_synth_RsuA/RluB_CS.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   InterPro; IPR036986; S4_RNA-bd_sf.
DR   Pfam; PF00849; PseudoU_synth_2; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   SUPFAM; SSF55120; SSF55120; 1.
DR   TIGRFAMs; TIGR00093; TIGR00093; 1.
DR   PROSITE; PS01149; PSI_RSU; 1.
DR   PROSITE; PS50889; S4; 1.
PE   3: Inferred from homology;
DR   PRODOM; A4AV85.
DR   SWISS-2DPAGE; A4AV85.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001602};
KW   Isomerase {ECO:0000256|RuleBase:RU003887,
KW   ECO:0000256|SAAS:SAAS00999454};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001602};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182,
KW   ECO:0000256|SAAS:SAAS00999393}.
FT   DOMAIN        6     71       S4 RNA-binding. {ECO:0000259|PROSITE:
FT                                PS50889}.
SQ   SEQUENCE   245 AA;  28249 MW;  F2E6689840ACF022 CRC64;
     MTQKETRINK YLSEVGYCSR RAADKLIDQG RVTINGKVPE MGTKIISGDE VRVDGELISE
     PKEKPVYLAF NKPIGIVCTT DTRVEKDNII DFINYPKRIF PIGRLDKPSQ GLIFLTNDGD
     IVNKILRARN HHEKEYLVTV DKPINKKFLD QMASGVPILD TVTRKCEITE VNKYQFKIIL
     TQGLNRQIRR MCEYLGYNVK KLKRIRIMNV KLDMPIGKWR NLTNSELQEI NRLVSGSSKT
     HNKIK
//

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