(data stored in SCRATCH zone)

SWISSPROT: A4AVM7_MARSH

ID   A4AVM7_MARSH            Unreviewed;       475 AA.
AC   A4AVM7;
DT   03-APR-2007, integrated into UniProtKB/TrEMBL.
DT   03-APR-2007, sequence version 1.
DT   08-MAY-2019, entry version 75.
DE   SubName: Full=DNA binding protein {ECO:0000313|EMBL:EAQ99957.1};
GN   OrderedLocusNames=FB2170_01247 {ECO:0000313|EMBL:EAQ99957.1};
OS   Maribacter sp. (strain HTCC2170 / KCCM 42371).
OC   Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Maribacter.
OX   NCBI_TaxID=313603 {ECO:0000313|EMBL:EAQ99957.1, ECO:0000313|Proteomes:UP000001602};
RN   [1] {ECO:0000313|EMBL:EAQ99957.1, ECO:0000313|Proteomes:UP000001602}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HTCC2170 / KCCM 42371 {ECO:0000313|Proteomes:UP000001602};
RX   PubMed=21037013; DOI=10.1128/JB.01207-10;
RA   Oh H.M., Kang I., Yang S.J., Jang Y., Vergin K.L., Giovannoni S.J.,
RA   Cho J.C.;
RT   "Complete genome sequence of strain HTCC2170, a novel member of the
RT   genus Maribacter in the family Flavobacteriaceae.";
RL   J. Bacteriol. 193:303-304(2011).
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DR   EMBL; CP002157; EAQ99957.1; -; Genomic_DNA.
DR   RefSeq; WP_013304943.1; NC_014472.1.
DR   STRING; 313603.FB2170_01247; -.
DR   EnsemblBacteria; EAQ99957; EAQ99957; FB2170_01247.
DR   KEGG; fbc:FB2170_01247; -.
DR   eggNOG; ENOG4105X7U; Bacteria.
DR   eggNOG; COG2207; LUCA.
DR   OMA; EVGYNNK; -.
DR   OrthoDB; 1268974at2; -.
DR   BioCyc; MSP313603:G1GNS-512-MONOMER; -.
DR   Proteomes; UP000001602; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR   Pfam; PF12833; HTH_18; 1.
DR   PRINTS; PR00032; HTHARAC.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; A4AVM7.
DR   SWISS-2DPAGE; A4AVM7.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001602};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001602};
KW   Transcription {ECO:0000256|SAAS:SAAS00048810};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00048643};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    108    125       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    137    162       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    168    186       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    198    218       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    238    257       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    277    296       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    308    326       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      360    468       HTH araC/xylS-type. {ECO:0000259|PROSITE:
FT                                PS01124}.
FT   COILED      383    403       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   475 AA;  55231 MW;  4B9B54E3EB62E534 CRC64;
     MRHIGILITF FLLCIKAYPA VPIEHKESFY NNKILPNFIF STTSNLFEED EVYGQSPILD
     NGITKISLGL NTFSLNVIEP TLFSNNTSAA NISQSITNDY PPRINLSSFL YLYVALIGFY
     IAAVLQFNKK IDRIAKILIS CFIFIHSIFI LHICLNMTNY HYQYPHSFRM STLFSFLYGP
     LLYFYFKRIT QQYQFKKEDL LHLTPTLLLL FVLFPTYILP SDEKLTLMIE RVSLGRSVTD
     LAIIVFKLLS LTIYGYFIRK VYLNSKSNKG LGKQNRLWQS NLYTIHFIYI GSYAAYGILL
     SNGITSGFLY HLQVILMALM VMYLGYSANV QPNVFSGIFT LSDKYFFKYE KSGLTNSLSQ
     ELKTLLLDLL NKEKIYRENN INLEKLANRL NTTRHNASQV INEHFDMNFH ELINKYRIDE
     AKDIFNRDYQ RNLNIIDVAY EVGYNNKVTF NKAFKKDTNL TPSEYQRVAL KATTM
//

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