(data stored in SCRATCH zone)

SWISSPROT: A5C6P1_VITVI

ID   A5C6P1_VITVI            Unreviewed;       190 AA.
AC   A5C6P1;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   16-JAN-2019, entry version 64.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAN77663.1};
GN   OrderedLocusNames=VIT_04s0043g00310 {ECO:0000313|EMBL:CBI28635.3};
GN   ORFNames=04A18_50 {ECO:0000313|EMBL:CAQ58596.1}, VITISV_027383
GN   {ECO:0000313|EMBL:CAN77663.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN77663.1};
RN   [1] {ECO:0000313|Proteomes:UP000009183}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX   PubMed=17721507; DOI=10.1038/nature06148;
RG   The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA   Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C.,
RA   Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A.,
RA   Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D.,
RA   Poulain J., Bruyere C., Billault A., Segurens B., Gouyvenoux M.,
RA   Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C.,
RA   Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I.,
RA   Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G.,
RA   Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D.,
RA   Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F.,
RA   Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F.,
RA   Weissenbach J., Quetier F., Wincker P.;
RT   "The grapevine genome sequence suggests ancestral hexaploidization in
RT   major angiosperm phyla.";
RL   Nature 449:463-467(2007).
RN   [2] {ECO:0000313|EMBL:CAN77663.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A.,
RA   Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J.,
RA   Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D.,
RA   Macalma T., Facci M., Mitchell J.T., Perazzolli M., Eldredge G.,
RA   Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y.,
RA   Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K.,
RA   Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C.,
RA   Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L.,
RA   Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir
RT   Vitis vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
RN   [3] {ECO:0000313|EMBL:CAQ58596.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaves {ECO:0000313|EMBL:CAQ58596.1};
RA   Genoscope - CEA;
RL   Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:CAQ58596.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaves {ECO:0000313|EMBL:CAQ58596.1};
RA   Chopin F., Bruyere C., Buisine N., Dossat C., Choisne N., Tassin J.,
RA   Lemainque A., Segurens B., Policriti A., Morgante M., Ratnaparkhe MR.,
RA   Aubourg A., Wincker P., Caboche M., Weissenbach J., Adam-Blondon AF.;
RT   "The grapevine high level of heterozygocity is mainly due to small
RT   insertion/deletion events.";
RL   Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:CBI28635.3}
RP   NUCLEOTIDE SEQUENCE.
RA   Vitulo N., Olivier J., Forcato C., Albiero A., D'Angelo M.,
RA   Zimbello R., Schiavon R., Rigobello C., Policriti A., Clepet C.,
RA   Casagrande A., Choisne N., Vezzi A., Hugueney P., Horner D., Mica E.,
RA   Cattonaro F., Del Fabbro C., Alaux M., Di Gaspero G., Scalabrin S.,
RA   Pesole G., Delledonne M., Pezzotti M., Pe E.M., Caboche M.,
RA   Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.,
RA   Morgante M., Valle G.;
RT   "High quality assembly and annotation of grapevine genome.";
RL   Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AM484169; CAN77663.1; -; Genomic_DNA.
DR   EMBL; CU914148; CAQ58596.1; -; Genomic_DNA.
DR   EMBL; FN595763; CBI28635.3; -; Genomic_DNA.
DR   RefSeq; XP_002265803.1; XM_002265767.4.
DR   STRING; 29760.VIT_04s0043g00310.t01; -.
DR   EnsemblPlants; VIT_04s0043g00310.t01; VIT_04s0043g00310.t01; VIT_04s0043g00310.
DR   GeneID; 100257053; -.
DR   Gramene; VIT_04s0043g00310.t01; VIT_04s0043g00310.t01; VIT_04s0043g00310.
DR   KEGG; vvi:100257053; -.
DR   eggNOG; KOG4067; Eukaryota.
DR   eggNOG; ENOG4111H6N; LUCA.
DR   HOGENOM; HOG000272739; -.
DR   OMA; DTFHWIL; -.
DR   OrthoDB; 1223488at2759; -.
DR   Proteomes; UP000009183; Chromosome 4.
DR   InterPro; IPR008493; DUF775.
DR   InterPro; IPR031318; OPI10.
DR   PANTHER; PTHR12925; PTHR12925; 1.
DR   Pfam; PF05603; DUF775; 1.
PE   4: Predicted;
DR   PRODOM; A5C6P1.
DR   SWISS-2DPAGE; A5C6P1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000009183};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009183}.
FT   DOMAIN        1    185       DUF775. {ECO:0000259|Pfam:PF05603}.
SQ   SEQUENCE   190 AA;  21039 MW;  59FB06A9F70FF628 CRC64;
     MFGVVFPNRS FPMDISTFSQ IDTFHWVLDM NTFVGEAYDQ VRELCIFLLN SFSLPADKAL
     AVYIQSPGSP FLFCGAVTLS RPSAVLSLPW PEPGSGGEMR LTASGDAPLS AKIGVSVEDL
     AALPSLDVAA EKRIERLAMK VGENLFNFMQ SFCGVDGSKL VVPMDILDRW FKKFRERAKR
     DPEYLKGFAL
//

If you have problems or comments...

PBIL Back to PBIL home page