(data stored in SCRATCH zone)

SWISSPROT: A5FTP8_ACICJ

ID   A5FTP8_ACICJ            Unreviewed;       894 AA.
AC   A5FTP8;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   07-JUN-2017, entry version 51.
DE   SubName: Full=Sigma-70 region 4 domain protein {ECO:0000313|EMBL:ABQ28980.1};
GN   OrderedLocusNames=Acry_3369 {ECO:0000313|EMBL:ABQ28980.1};
OS   Acidiphilium cryptum (strain JF-5).
OG   Plasmid pACRY02 {ECO:0000313|EMBL:ABQ28980.1,
OG   ECO:0000313|Proteomes:UP000000245}.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC   Acetobacteraceae; Acidiphilium.
OX   NCBI_TaxID=349163 {ECO:0000313|EMBL:ABQ28980.1, ECO:0000313|Proteomes:UP000000245};
RN   [1] {ECO:0000313|EMBL:ABQ28980.1, ECO:0000313|Proteomes:UP000000245}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JF-5 {ECO:0000313|Proteomes:UP000000245};
RC   PLASMID=Plasmid pACRY02 {ECO:0000313|Proteomes:UP000000245};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Magnuson T.,
RA   Richardson P.;
RT   "Complete sequence of plasmid2 pACRY02 of Acidiphilium cryptum JF-5.";
RL   Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000690; ABQ28980.1; -; Genomic_DNA.
DR   ProteinModelPortal; A5FTP8; -.
DR   EnsemblBacteria; ABQ28980; ABQ28980; Acry_3369.
DR   KEGG; acr:Acry_3369; -.
DR   OrthoDB; POG091H4MDG; -.
DR   Proteomes; UP000000245; Plasmid pACRY02.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88659; SSF88659; 1.
PE   4: Predicted;
DR   PRODOM; A5FTP8.
DR   SWISS-2DPAGE; A5FTP8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000245};
KW   Plasmid {ECO:0000313|EMBL:ABQ28980.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000245}.
FT   DOMAIN      289    334       Sigma70_r4. {ECO:0000259|Pfam:PF04545}.
SQ   SEQUENCE   894 AA;  98951 MW;  9FFF3FF4877BBA30 CRC64;
     MHSIYILFLS QLQRVSRLKH MNASGTTLRD ALDEIELARP TAQAVSENPD SPLMTMSVAN
     VLDLRNALLS REVSFRGFSV PILKQIFSHL DEAGYSHAGA ARAQMNARQQ DDARVAALAA
     VFRVLALVPF PEALLEADPA IRLRRILEDF VAARDSKDDW RAGVHTLADL LSDWKGIMTR
     LQQADNFGAK STTDLKLLVD GALLRATEAV ASVVSKKDVA TERLNLAGIL AGDIPVPLQH
     MIGRADLDKV RDALPAFLAE PAHHLLGGSH GRKNRATELP GFPGVIMRNE KQAQILAMRY
     GFFDKPATLD VVSNTVGITK ERVRQIEVEA VKHLGREPSR QKVEPIIEAH LPQLIEILTD
     GTGYLPDEAS GEINRKAMIA HGVPGTVVLG LEALFPSASD LANRYGTRQG NGWLLGLDDK
     ARGRAQATSK LLSTRLRGRR NAILVSDAME AAGATTSEIS AAVAMVPGAA IVGRHIIRDI
     DQLNERRAYQ LYDLAIKLDD GAPFDLTRLC EAYAAATPEE NNMPNCVPRA IAGAKGMFLN
     VIDRIWFPLQ EKLPERPAGH APLPYTIRPD MSQTSIWRRP FGENTVAHFL HGQITRHGPI
     RTLDLAELTL PENYGSRSET LSGAQPIMKM NPNFVHLSPG IYGLVEQLPK LTDPRRALPE
     VLLADRIVRA YTDARRVSPA AARIYPIWDM AFEYRLARWA AEHANKKVAG ALFDVVDPRM
     WPIAEDEITR WQAVKAEMSD RKQHHQTEQP DEYALPPADR FLASMITLWW MGEISWTLIG
     RTTNQRDMHT PASHLALLAR FGLARAPKHW QDRHLPTADL RPTLEAVIRD AVHADGISWR
     NPEMRALLSR DAGPGGWVDN DAVSRALQRP GDPQLSVYGR TKVRRGRVLQ PVNG
//

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