(data stored in SCRATCH zone)

SWISSPROT: A8FPG3_SHESH

ID   A8FPG3_SHESH            Unreviewed;       235 AA.
AC   A8FPG3;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 65.
DE   SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABV34736.1};
GN   OrderedLocusNames=Ssed_0123 {ECO:0000313|EMBL:ABV34736.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34736.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34736.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34736.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000821; ABV34736.1; -; Genomic_DNA.
DR   RefSeq; WP_012004262.1; NC_009831.1.
DR   ProteinModelPortal; A8FPG3; -.
DR   STRING; 425104.Ssed_0123; -.
DR   EnsemblBacteria; ABV34736; ABV34736; Ssed_0123.
DR   KEGG; sse:Ssed_0123; -.
DR   eggNOG; ENOG4107A5B; Bacteria.
DR   eggNOG; COG4662; LUCA.
DR   HOGENOM; HOG000263701; -.
DR   KO; K05773; -.
DR   OMA; EVGVAMM; -.
DR   OrthoDB; POG091H05AR; -.
DR   BioCyc; SSED425104:GH7Q-126-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0006810; P:transport; IEA:UniProtKB-KW.
DR   CDD; cd06261; TM_PBP2; 1.
DR   InterPro; IPR000515; MetI-like.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; A8FPG3.
DR   SWISS-2DPAGE; A8FPG3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     35     54       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     66     86       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    106    127       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    157    182       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    202    226       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN       27    223       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   235 AA;  25506 MW;  CEBD3E5B1D1D15A9 CRC64;
     MNEGWLALLQ QALGLLFSLD PDVWSIVSVS FSVSFAALGI TLLPSMILGF MLAFGRFPGR
     WFVTNLIQTL QSIPTVVIGL LVYLMLTRMG PLGDLRWLFT QKGMILGQMM ICAPVLVAMS
     QAAFTSVDRR AWETSRTLGA SWFRGILTVC RELKVPLLMA IVAGFSRILT EVGCSMMVGG
     NIADVTRNIP TAIALETSKG DFAQAIALGL VLLILSLVLN FTLGALRGKA EPRSH
//

If you have problems or comments...

PBIL Back to PBIL home page