(data stored in SCRATCH zone)

SWISSPROT: A8FPH1_SHESH

ID   A8FPH1_SHESH            Unreviewed;       677 AA.
AC   A8FPH1;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   30-AUG-2017, entry version 64.
DE   SubName: Full=TonB-dependent receptor, plug {ECO:0000313|EMBL:ABV34744.1};
GN   OrderedLocusNames=Ssed_0131 {ECO:0000313|EMBL:ABV34744.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34744.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34744.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34744.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane
CC       {ECO:0000256|RuleBase:RU003357}.
CC   -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC       {ECO:0000256|RuleBase:RU003357}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000821; ABV34744.1; -; Genomic_DNA.
DR   RefSeq; WP_012004270.1; NC_009831.1.
DR   ProteinModelPortal; A8FPH1; -.
DR   STRING; 425104.Ssed_0131; -.
DR   EnsemblBacteria; ABV34744; ABV34744; Ssed_0131.
DR   KEGG; sse:Ssed_0131; -.
DR   eggNOG; ENOG4105EBY; Bacteria.
DR   eggNOG; COG1629; LUCA.
DR   HOGENOM; HOG000223378; -.
DR   OMA; AAEYQYQ; -.
DR   OrthoDB; POG091H0HKW; -.
DR   BioCyc; SSED425104:GH7Q-134-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0004872; F:receptor activity; IEA:InterPro.
DR   GO; GO:0006810; P:transport; IEA:InterPro.
DR   Gene3D; 2.170.130.10; -; 1.
DR   Gene3D; 2.40.170.20; -; 1.
DR   InterPro; IPR012910; Plug_dom.
DR   InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR   Pfam; PF07715; Plug; 1.
DR   Pfam; PF00593; TonB_dep_Rec; 1.
PE   3: Inferred from homology;
DR   PRODOM; A8FPH1.
DR   SWISS-2DPAGE; A8FPH1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   Membrane {ECO:0000256|RuleBase:RU003357};
KW   Receptor {ECO:0000313|EMBL:ABV34744.1};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   TonB box {ECO:0000256|RuleBase:RU003357}.
FT   SIGNAL        1     25       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        26    677       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5002722075.
FT   DOMAIN       51    153       Plug. {ECO:0000259|Pfam:PF07715}.
FT   DOMAIN      246    675       TonB_dep_Rec. {ECO:0000259|Pfam:PF00593}.
SQ   SEQUENCE   677 AA;  74238 MW;  4CD956CCE31C3D8C CRC64;
     MKVQQKIIKM SAIALAIGSS GAVFADDIDR DPILNVNEVI VVHGERPTAT EVATTHWSID
     EDEIKALGAQ SLEQVLKNVP GVYVRTGGQG TPRVDIRGFK TRHVTLLING VPANGAEDGQ
     FDPSVIPTSQ IASVEVSVGP TSVLYGPGGA GGVINIITKQ GDDASTLSGR LEASGEDTFN
     GDISAAGSGD NWQGLVSVSH QQTNGFPLSG DYPHNDVQLD DVRANSDKEI DNIYAQGSYW
     LSDNTQVTAN MSLRSGQWGK PSRDGSGSGT VKFERADDYD AKTFQLGMAH KFSEMFTLRG
     FGYHNQSDVL ETQYTDSSYT KVKQSQDGRS KVQGGNLQFI TNFGDVGLLT SSLIAENQSW
     ESTTSKPSTG DKSSQKQSRV LDGYSGGSGG GNGGGSSNFD DSAWLYTLAA EYQYQDDGYY
     GFTIGGALHD QDRVKESEND YSGQLSGFWQ AFEQTRFNAG IARKVRFPSM KNLYSQSSGN
     ADLVAETSKH FELGVEQELG ASTALSVAGY YTDAENYIAK DMSGVYQNMG RYQFKGVDVS
     LNNQFIDDLS LTFVYSFLDT EDKDAFDGMG TLEYRPRHQL RFQADYELPF AMRINMNIER
     IMGQVYYEQE KVNGNKVWTE QSLKDYTLLD LNLVQPVLDD KLELYIRATN LLDENYYQSD
     AIPQAGRQVF VGISWQI
//

If you have problems or comments...

PBIL Back to PBIL home page