(data stored in SCRATCH zone)

SWISSPROT: A8FPK1_SHESH

ID   A8FPK1_SHESH            Unreviewed;       297 AA.
AC   A8FPK1;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   08-MAY-2019, entry version 72.
DE   SubName: Full=Conserved hypothetical transcriptional regulator {ECO:0000313|EMBL:ABV34774.1};
GN   OrderedLocusNames=Ssed_0161 {ECO:0000313|EMBL:ABV34774.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34774.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34774.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34774.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000821; ABV34774.1; -; Genomic_DNA.
DR   RefSeq; WP_012004300.1; NC_009831.1.
DR   STRING; 425104.Ssed_0161; -.
DR   EnsemblBacteria; ABV34774; ABV34774; Ssed_0161.
DR   KEGG; sse:Ssed_0161; -.
DR   eggNOG; ENOG4108X9K; Bacteria.
DR   eggNOG; ENOG410XPIV; LUCA.
DR   HOGENOM; HOG000233520; -.
DR   OMA; MGKAQSR; -.
DR   OrthoDB; 750230at2; -.
DR   BioCyc; SSED425104:G1G9Y-170-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; A8FPK1.
DR   SWISS-2DPAGE; A8FPK1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002015};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        3     60       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   297 AA;  33670 MW;  8841A2C7BCDC996C CRC64;
     MNWTLAQLEA FVLSVKCGSF SAAARKLGRA QSRVSTAISN LEADLGFELF DRTAKLPVLT
     QHGEDMFVEA QAVLEQCQRL QSRALTVTTG EEIALTIAMD EAVPINTFES LIERVAQRFP
     LLKLTIINGS QDDIAQWVDE GKADMGILFY VKSFSDSLEF MSIGQFYHSL IVSPKHPLSK
     IESPTIDELN QYRQLVIRDR VGKNQAKALS ANHWYIDSYY YITALVIRGL GWALVPDHLA
     NSEWYTDEVI ELSTENIPDP LLVEMGVVNR RDRAYGPVME WIFLEIESMF KNRLKNE
//

If you have problems or comments...

PBIL Back to PBIL home page