(data stored in SCRATCH zone)

SWISSPROT: A8FPL3_SHESH

ID   A8FPL3_SHESH            Unreviewed;       804 AA.
AC   A8FPL3;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 56.
DE   SubName: Full=RNA binding S1 domain protein {ECO:0000313|EMBL:ABV34786.1};
GN   OrderedLocusNames=Ssed_0173 {ECO:0000313|EMBL:ABV34786.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34786.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34786.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34786.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV34786.1; -; Genomic_DNA.
DR   ProteinModelPortal; A8FPL3; -.
DR   STRING; 425104.Ssed_0173; -.
DR   EnsemblBacteria; ABV34786; ABV34786; Ssed_0173.
DR   KEGG; sse:Ssed_0173; -.
DR   eggNOG; ENOG4105BZM; Bacteria.
DR   eggNOG; COG2183; LUCA.
DR   HOGENOM; HOG000270497; -.
DR   KO; K06959; -.
DR   OMA; GFLRIRD; -.
DR   OrthoDB; POG091H046K; -.
DR   BioCyc; SSED425104:GH7Q-176-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   Gene3D; 1.10.10.650; -; 1.
DR   Gene3D; 1.10.3500.10; -; 1.
DR   Gene3D; 3.30.420.140; -; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_dom.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR023323; Tex-like_dom.
DR   InterPro; IPR023319; Tex-like_HTH_dom.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF47781; SSF47781; 2.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
DR   PRODOM; A8FPL3.
DR   SWISS-2DPAGE; A8FPL3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015}.
FT   DOMAIN      673    742       S1 motif. {ECO:0000259|PROSITE:PS50126}.
SQ   SEQUENCE   804 AA;  87812 MW;  B93AA196DB4BF9A2 CRC64;
     MLSLAPLKSF YPGTTQLLMQ MTQNIAQIIA QELNVREQQV TSTITLLDDG ATVPFVARYR
     KEATGGLDDT QLRTLNSRLS YLRDLNDRRA VILSSIDTQG KLTPELKKAL VDADSKTRLE
     DLYLPYKPKR RTKGQIAIEA GIEPLADYLF GNRQADIELE AGKFINAEAG FADSKSVLDG
     ARFIIMERFA EDAALLQKVR QHLSQNSVLE SKMVKGKEKE GAKFRDYFEH TEKLSKIPSH
     RALAMLRGRN EGMLSLSMNA DPDNESKQSS YCAVIIADHF KLNLTDSAVD QWLKTVVTAT
     WRIKIALQME TEFLAKMREQ AESEAINVFA KNLGDLLMAA PAGAKATLGL DPGLRSGVKV
     AIVNNTGKLT AHTTIFPHAP QNQWDKSVRT LANLAKMHKV ELIAVGNGTA SRETDKLAGE
     LIASVKAELP GLTKIMVSEA GASVYSASEL AANEFPDLDV SIRGAVSIAR RLQDPLAELV
     KIEPKSIGVG QYQHDVSQSQ LSQSLEGVVE DCVNGVGVDL NMASAPLLSQ VAGLNKTLAR
     NIVTYRDENG QFKQRKQLLK VARLGPKAYE QAAGFLRIVD GDNPLDASSV HPEAYSLVES
     IAKAKDQALD TLMGNSELLR SLKAEDFITE KFGLPTVTDI LTELDKPGRD PRGEFKTATF
     KEGVEEVKDL KLDMILEGVV TNVTNFGAFV DVGVHQDGLV HISSLTDKFV SDPHTVVKAG
     DVVKVKVMQV DVERKRIGLS MRLDEKAADM PAGRSNQKSQ TGSKPAAKSN QQGKGKPQHR
     SQPKQQANAA MGNAFADAFA KLKK
//

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