(data stored in SCRATCH zone)

SWISSPROT: A8FPU3_SHESH

ID   A8FPU3_SHESH            Unreviewed;       320 AA.
AC   A8FPU3;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 64.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABV34866.1};
GN   OrderedLocusNames=Ssed_0253 {ECO:0000313|EMBL:ABV34866.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34866.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34866.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34866.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV34866.1; -; Genomic_DNA.
DR   RefSeq; WP_012004392.1; NC_009831.1.
DR   ProteinModelPortal; A8FPU3; -.
DR   STRING; 425104.Ssed_0253; -.
DR   EnsemblBacteria; ABV34866; ABV34866; Ssed_0253.
DR   KEGG; sse:Ssed_0253; -.
DR   eggNOG; ENOG4108NTA; Bacteria.
DR   eggNOG; COG0583; LUCA.
DR   HOGENOM; HOG000103695; -.
DR   OMA; QVRCEGN; -.
DR   OrthoDB; POG091H0FQL; -.
DR   BioCyc; SSED425104:GH7Q-256-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; A8FPU3.
DR   SWISS-2DPAGE; A8FPU3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN        9     66       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     26     45       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   320 AA;  36265 MW;  7A2635CC3CCEB63B CRC64;
     MNLDNLARID LNLLVILQVL LEEQSVTRAA SRLHLSQSAL SKSLNRLRDT LDDPLFIRTA
     HGLKPTAHAV QLSDKLPSLL ENLSQLTQPP TFTPASSDRK FSFAMVESAY ETLLPYFIGP
     LLSNAPNLRL DSYGWMGKSI QDLQKGQVDF GIAGRDLHPK SNVHMDRLPD GIAHQLLFTD
     HQICLVREEH PILSAITTGN WNLDIYLEMS HVQVRCEGNE WWALDYHLAE QGHRRRLSTT
     VPDFYGAASV CAHSDLIFTV PSSFARHAKK LYPLVELPLP FDFIPLAYVL LWHERNNDEP
     GHRWMRETIC KSVADAFSNI
//

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