(data stored in SCRATCH zone)

SWISSPROT: A8FPV6_SHESH

ID   A8FPV6_SHESH            Unreviewed;       311 AA.
AC   A8FPV6;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 64.
DE   SubName: Full=Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:ABV34879.1};
GN   OrderedLocusNames=Ssed_0266 {ECO:0000313|EMBL:ABV34879.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34879.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34879.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34879.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV34879.1; -; Genomic_DNA.
DR   RefSeq; WP_012004405.1; NC_009831.1.
DR   ProteinModelPortal; A8FPV6; -.
DR   STRING; 425104.Ssed_0266; -.
DR   EnsemblBacteria; ABV34879; ABV34879; Ssed_0266.
DR   KEGG; sse:Ssed_0266; -.
DR   eggNOG; ENOG4106JEA; Bacteria.
DR   eggNOG; ENOG410Y9RN; LUCA.
DR   HOGENOM; HOG000103695; -.
DR   OMA; RYVCLFR; -.
DR   OrthoDB; POG091H0FQL; -.
DR   BioCyc; SSED425104:GH7Q-269-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; A8FPV6.
DR   SWISS-2DPAGE; A8FPV6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN        9     66       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     26     45       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   311 AA;  35159 MW;  2792623662CCF318 CRC64;
     MDLIKLSRIS MKHLITLHVM LDTLSVTASA QRLCLSPSSI SKTLGQLRNS LNDELFYRHG
     NKLVATPLAR RLGPSVHQMI NDMNQIMTQE VFDPARYQGR FSLAMRESTF ELLAAKLSAH
     VLALAPNIRL DIWSKDSVGF DGLAKGTLDF IILPHDRSQP PSTHSDLVWE TLTNDEMVCL
     MSPEHPLVKK GNKEQPFTLD DYLSYGHIGI TDTDLNTPFF EMQLAQQELQ RKVAISVPDF
     GGAALMCHHS ELLFTCSRRW AETAFQAKGL QIKPLPFNYG EVVYSLVWHR PSMNDPAHRW
     LYEQILAIGC N
//

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