(data stored in SCRATCH zone)

SWISSPROT: A8FPX2_SHESH

ID   A8FPX2_SHESH            Unreviewed;       471 AA.
AC   A8FPX2;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   30-AUG-2017, entry version 83.
DE   SubName: Full=Nitrogen metabolism transcriptional regulator, NtrC, fis family {ECO:0000313|EMBL:ABV34895.1};
GN   OrderedLocusNames=Ssed_0282 {ECO:0000313|EMBL:ABV34895.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34895.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34895.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34895.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000821; ABV34895.1; -; Genomic_DNA.
DR   RefSeq; WP_012004421.1; NC_009831.1.
DR   ProteinModelPortal; A8FPX2; -.
DR   STRING; 425104.Ssed_0282; -.
DR   EnsemblBacteria; ABV34895; ABV34895; Ssed_0282.
DR   KEGG; sse:Ssed_0282; -.
DR   eggNOG; ENOG4105C1W; Bacteria.
DR   eggNOG; COG2204; LUCA.
DR   HOGENOM; HOG000058489; -.
DR   KO; K07712; -.
DR   OMA; DWTGNIR; -.
DR   OrthoDB; POG091H03UM; -.
DR   BioCyc; SSED425104:GH7Q-291-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0005622; C:intracellular; IEA:GOC.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0000156; F:phosphorelay response regulator activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0008134; F:transcription factor binding; IEA:InterPro.
DR   GO; GO:0006808; P:regulation of nitrogen utilization; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd00156; REC; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR011006; CheY-like_superfamily.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR010114; Sig_transdc_resp-reg_NtrC.
DR   InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   PANTHER; PTHR32071:SF45; PTHR32071:SF45; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF00072; Response_reg; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00448; REC; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF52172; SSF52172; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   TIGRFAMs; TIGR01818; ntrC; 1.
DR   PROSITE; PS50110; RESPONSE_REGULATORY; 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
DR   PRODOM; A8FPX2.
DR   SWISS-2DPAGE; A8FPX2.
KW   ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00193,
KW   ECO:0000256|SAAS:SAAS00110192};
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00009904};
KW   Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00193,
KW   ECO:0000256|SAAS:SAAS00110083};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00193,
KW   ECO:0000256|SAAS:SAAS00814760};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00193,
KW   ECO:0000256|SAAS:SAAS00814754}.
FT   DOMAIN        6    120       Response regulatory.
FT                                {ECO:0000259|PROSITE:PS50110}.
FT   DOMAIN      141    370       Sigma-54 factor interaction.
FT                                {ECO:0000259|PROSITE:PS50045}.
FT   NP_BIND     169    176       ATP. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00193}.
FT   NP_BIND     232    241       ATP. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00193}.
FT   MOD_RES      55     55       4-aspartylphosphate.
FT                                {ECO:0000256|PROSITE-ProRule:PRU00169}.
SQ   SEQUENCE   471 AA;  52333 MW;  57E5AF8066C81E85 CRC64;
     MSITEQVWVL DDDSSIRWVV ERALKGASIT SASFAAAESL WEALELAQPK VIISDIRMPG
     TDGLSLLERI QVHYPHIPVI IMTAHSDLDS AVSAYQAGAF EYLPKPFDID EAIALVERAL
     THSTEQASNT PEEIQVKAPE IIGEAPAMQE VFRAIGRLSR SSISVLINGQ SGTGKELVAG
     ALHKHSPRKE KPFIAINMAA IPKDLIESEL FGHEKGAFTG AAGVRQGRFE QANGGTLFLD
     EIGDMPLDVQ TRLLRVLADG QFYRVGGHSP VQVDVRIIAA THQDLELLVQ KGDFREDLFH
     RLNVIRVHLP PLSQRREDIP QLARHFLSSA AKEIAVEPKV LTSETAKKLS ELPWPGNVRQ
     LENTCRWLMV MASGQEILPQ DLPPELLKEP NSSNIDRSGE TADWQESLKN WINQRLKEGE
     SDLLTEVQPA FERILLETAL EHTNGHKQEA AKRLGWGRNT LTRKLKELAM E
//

If you have problems or comments...

PBIL Back to PBIL home page