(data stored in SCRATCH zone)

SWISSPROT: A8FQ43_SHESH

ID   A8FQ43_SHESH            Unreviewed;       576 AA.
AC   A8FQ43;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 51.
DE   SubName: Full=Oligopeptide transporter, OPT family {ECO:0000313|EMBL:ABV34966.1};
GN   OrderedLocusNames=Ssed_0353 {ECO:0000313|EMBL:ABV34966.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34966.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34966.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34966.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV34966.1; -; Genomic_DNA.
DR   RefSeq; WP_012140704.1; NC_009831.1.
DR   STRING; 425104.Ssed_0353; -.
DR   EnsemblBacteria; ABV34966; ABV34966; Ssed_0353.
DR   KEGG; sse:Ssed_0353; -.
DR   eggNOG; ENOG4105EPD; Bacteria.
DR   eggNOG; COG1297; LUCA.
DR   HOGENOM; HOG000267187; -.
DR   OMA; TAYVWIF; -.
DR   OrthoDB; POG091H01S2; -.
DR   BioCyc; SSED425104:GH7Q-362-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   InterPro; IPR004813; OPT.
DR   Pfam; PF03169; OPT; 2.
PE   4: Predicted;
DR   PRODOM; A8FQ43.
DR   SWISS-2DPAGE; A8FQ43.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     33       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     39     58       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     78    101       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    107    128       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    164    185       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    205    225       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    232    251       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    271    293       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    305    326       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    332    353       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    418    440       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    511    536       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    548    573       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   576 AA;  61590 MW;  0598076D344856FD CRC64;
     MPTSNNISQP LSIRALLTGM TLGSLLVLCN LYMALRIGWS INMSVLASLL GFVSWKAVET
     TIGCRAWDPS ETNIQQTVAS AAGATISAGL VAPIPAYLIL TDTQFEYWPM VIWMIAISLL
     GICVASAIRP AMLNNERLRF PAGIATAEVI TDMFSSGRIA RHRIIALLSA MAITISHRIF
     IPVSYKIPLG FSIPGQNAMA GTSISAKNLG FIIDPSYMLL AFGAIIGTRA AISLSIGCLI
     AWLGLGPYIL GQGWEQAGPV DGNWFSYIID WLVWPGVAMM LASALTTTAI TLFKSDRKNR
     LSLMWGLPEF LLLGTITPVI VFLQVWLFDI SWFAAILAVP LAFLFAIVAA QVVGETGIPP
     VGALGKLSQL SFSIISPGSV TTNLMTANVA GGAAGQATDL LNDFKAGHIL GTNPRHQIFA
     QAMGILVGCL TSAGIFMLLI PNPAEQLMTE QWPAPGVATW KVIAIALTDG LEAIPQSARY
     AMFVGIVAAT INELLPLIVQ EKWHRYLPSM SAMGLAFVLP AQVSMMLFIG AILAWGLRRL
     APRWSQRFLL AIAAGCIAGE SLAGVLGSLW HLLLSK
//

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