(data stored in SCRATCH zone)

SWISSPROT: A8FQ81_SHESH

ID   A8FQ81_SHESH            Unreviewed;       607 AA.
AC   A8FQ81;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 73.
DE   SubName: Full=ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ABV35004.1};
GN   OrderedLocusNames=Ssed_0391 {ECO:0000313|EMBL:ABV35004.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV35004.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV35004.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV35004.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV35004.1; -; Genomic_DNA.
DR   RefSeq; WP_012140741.1; NC_009831.1.
DR   ProteinModelPortal; A8FQ81; -.
DR   STRING; 425104.Ssed_0391; -.
DR   EnsemblBacteria; ABV35004; ABV35004; Ssed_0391.
DR   KEGG; sse:Ssed_0391; -.
DR   eggNOG; ENOG4105C9U; Bacteria.
DR   eggNOG; COG0514; LUCA.
DR   HOGENOM; HOG000044388; -.
DR   KO; K03654; -.
DR   OMA; QDMFLME; -.
DR   OrthoDB; POG091H011W; -.
DR   BioCyc; SSED425104:GH7Q-400-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0005622; C:intracellular; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR   GO; GO:0009432; P:SOS response; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR004589; DNA_helicase_ATP-dep_RecQ.
DR   InterPro; IPR006293; DNA_helicase_ATP-dep_RecQ_bac.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR010997; HRDC-like.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR032284; RecQ_Zn-bd.
DR   InterPro; IPR018982; RQC_domain.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   Pfam; PF16124; RecQ_Zn_bind; 1.
DR   Pfam; PF09382; RQC; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SMART; SM00956; RQC; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF47819; SSF47819; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   TIGRFAMs; TIGR01389; recQ; 1.
DR   TIGRFAMs; TIGR00614; recQ_fam; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
DR   PRODOM; A8FQ81.
DR   SWISS-2DPAGE; A8FQ81.
KW   ATP-binding {ECO:0000313|EMBL:ABV35004.1};
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   Helicase {ECO:0000313|EMBL:ABV35004.1};
KW   Hydrolase {ECO:0000313|EMBL:ABV35004.1};
KW   Nucleotide-binding {ECO:0000313|EMBL:ABV35004.1}.
FT   DOMAIN       34    202       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      225    370       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   DOMAIN      530    607       HRDC. {ECO:0000259|PROSITE:PS50967}.
SQ   SEQUENCE   607 AA;  68225 MW;  3846EB4F3845E671 CRC64;
     MEQAIDEPQL DPLSSSLQSV FGYRTFREGQ REVIEQSCSG YDCLVIMPTG GGKSLCYQLP
     ALQLPGLTIV VSPLISLMKD QVDSLTQMGV SAAYLNSSLP REESARILQQ MHKGEIKLLY
     VSPERLLQGH FIDRLHELHI SLFAIDEAHC ISQWGHDFRP EYAALGKLRE VFPHVPIMAL
     TATADQATRK DICDRLTISP FSLLTSFDRP NIRYTVAEKL NAANQLRQFV TDQKGTSGII
     YCSSRRRVDE VAERLRLQGH NAEAYHAGKT QEERADVQDR FLKDQLDIVV ATVAFGMGIN
     KSNVRYVVHY DIPKSVEAYY QETGRAGRDG LDSEALMLFD PADIGRVRHL IEQSEPGPQQ
     QVEFHKLNTM AAFAEAQTCR RQVLLHYFDE SALEPCGNCD ICLDPPKRYN GMQDAQKVLS
     CIYRLDQRFG VNHLIEVLRG SKAATVLERG HDKLSTWGIG KDKSHEYWLS IIRQIIHLGF
     ASQDITRGSS VKLNPSARSV LKGEVELLLA EPRIVLQTTK RRGSSTRAPL NYDRKLFARL
     KQLRRQLAEE LDVPPYLVFN DASLAEMAAM MPTSPGEMLA VNGVGERKLS RFGGEFLDEI
     ANYLADS
//

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