(data stored in SCRATCH zone)

SWISSPROT: A8FQH1_SHESH

ID   A8FQH1_SHESH            Unreviewed;       656 AA.
AC   A8FQH1;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 53.
DE   SubName: Full=Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:ABV35094.1};
GN   OrderedLocusNames=Ssed_0481 {ECO:0000313|EMBL:ABV35094.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV35094.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV35094.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV35094.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV35094.1; -; Genomic_DNA.
DR   RefSeq; WP_012140831.1; NC_009831.1.
DR   STRING; 425104.Ssed_0481; -.
DR   EnsemblBacteria; ABV35094; ABV35094; Ssed_0481.
DR   KEGG; sse:Ssed_0481; -.
DR   eggNOG; ENOG4105DA4; Bacteria.
DR   eggNOG; COG1138; LUCA.
DR   HOGENOM; HOG000274659; -.
DR   KO; K02198; -.
DR   OMA; HSNTQLA; -.
DR   OrthoDB; POG091H04V6; -.
DR   BioCyc; SSED425104:GH7Q-503-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0015232; F:heme transporter activity; IEA:InterPro.
DR   GO; GO:0017004; P:cytochrome complex assembly; IEA:InterPro.
DR   InterPro; IPR032523; CcmF_C.
DR   InterPro; IPR002541; Cyt_c_assembly.
DR   InterPro; IPR003567; Cyt_c_biogenesis.
DR   InterPro; IPR003568; Cyt_c_biogenesis_CcmF.
DR   Pfam; PF16327; CcmF_C; 1.
DR   Pfam; PF01578; Cytochrom_C_asm; 1.
DR   PRINTS; PR01410; CCBIOGENESIS.
DR   PRINTS; PR01411; CCMFBIOGNSIS.
DR   TIGRFAMs; TIGR00353; nrfE; 1.
PE   4: Predicted;
DR   PRODOM; A8FQH1.
DR   SWISS-2DPAGE; A8FQH1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM      6     30       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     42     62       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     96    114       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    121    142       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    178    198       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    210    230       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    250    267       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    274    294       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    314    332       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    353    374       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    394    413       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    425    443       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    449    472       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    484    504       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    612    633       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       89    296       Cytochrom_C_asm. {ECO:0000259|Pfam:
FT                                PF01578}.
FT   DOMAIN      316    629       CcmF_C. {ECO:0000259|Pfam:PF16327}.
SQ   SEQUENCE   656 AA;  72059 MW;  AE7D71F6E2CCE75F CRC64;
     MIPELGLILL IISTVSSLLL AVIPLVALHT KNHYLFSYVK TLTGLMTFTI TASILCLLIS
     FITDDFSVAY VANHSNTQLA LLYKVAAVWG SHEGSMLFWV VAIAIWGCII VFSSKYRDRL
     FIGRLIAILA SVIAGFNLFM LFTSNPFARL LPNFPIEGRD LNPILQDIGL IFHPPLLFLG
     YVGLTVTFAA AIAALLGGKL TRTHAGYLRP WALLAWVFLT GGNAFGSWWA YNELGWGGWW
     FWDPVENASF IPWLVATALL HSVVLSHRRD SFKVTTLLLC LLAFSLSLLG TFLVRSGIVQ
     SVHAFASDPT RGMSILFLLG VFVCGALTLF ALKANQIKSE LNFTLVSRDS VILLGNIVLV
     VAAISVLLGT FYPLLFELLD IGTLSVGAPY FNSIFIPLTF MAVLLMGAAP LISWKREKFS
     ALRPLIVLFI IALAIAETLS MLTGSGFNIW LFLGATSATW LILCLGYLLF RLRHQGIEGL
     ARKSAMLIAH LGVAISIIGA TSVSNFEQQE LLRMGPAQGK VVAGYTFVYE DTVNVDEKSY
     TAIQANIRVT DADDNFIGYI TPQRQTFKTN AMEVSKAGIM RNIFRDLYVS SGLQLSDTEY
     LIRISYKPLA CWIWLGGLLM MLGGTIAALT GLYRLRVQKA AYSNSNPIAT RIEGLA
//

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