(data stored in SCRATCH zone)

SWISSPROT: A8FQR8_SHESH

ID   A8FQR8_SHESH            Unreviewed;       309 AA.
AC   A8FQR8;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 64.
DE   SubName: Full=Putative LysR-like regular protein {ECO:0000313|EMBL:ABV35191.1};
GN   OrderedLocusNames=Ssed_0579 {ECO:0000313|EMBL:ABV35191.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV35191.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV35191.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV35191.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV35191.1; -; Genomic_DNA.
DR   RefSeq; WP_012140928.1; NC_009831.1.
DR   ProteinModelPortal; A8FQR8; -.
DR   STRING; 425104.Ssed_0579; -.
DR   EnsemblBacteria; ABV35191; ABV35191; Ssed_0579.
DR   KEGG; sse:Ssed_0579; -.
DR   eggNOG; ENOG4106M0E; Bacteria.
DR   eggNOG; COG0583; LUCA.
DR   HOGENOM; HOG000103695; -.
DR   OMA; VLQQTDM; -.
DR   OrthoDB; POG091H0FQL; -.
DR   BioCyc; SSED425104:GH7Q-601-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; A8FQR8.
DR   SWISS-2DPAGE; A8FQR8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN       10     67       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     27     46       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   309 AA;  34763 MW;  D46FADFAF09DFA74 CRC64;
     MTNEINWKST DLNLLVTFSY LYRYRSVSIA ADKSHVSQSA MSHSLARLRI LFDDQLFERK
     GHHMEPSEYA HHIAPIVGQL LDDISHRLLA KEQFTPLSYS GECRIGLTDY AEFIFAPSLY
     DAIQASAPKS QVSFINVNRH NYVNIADQDK LDVVIGSMPQ PHSDFDSKFL YTEKHVCLCD
     SQLFSNNQTL TVAEFAAVEQ ALVSPDGTLV TQVDKRLADL GLTRKVSVAS RNFLTIRSLL
     KKRKLIAIVP ELMAKAQGFD DQLTALTPPV DIADFEISLL WKSKLTNNDK NSWLRSVVQN
     VLSNAKSQS
//

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