(data stored in SCRATCH zone)

SWISSPROT: A8KX66_FRASN

ID   A8KX66_FRASN            Unreviewed;       673 AA.
AC   A8KX66;
DT   04-DEC-2007, integrated into UniProtKB/TrEMBL.
DT   04-DEC-2007, sequence version 1.
DT   08-MAY-2019, entry version 60.
DE   SubName: Full=Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABW09969.1};
GN   OrderedLocusNames=Franean1_0508 {ECO:0000313|EMBL:ABW09969.1};
OS   Frankia sp. (strain EAN1pec).
OC   Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.
OX   NCBI_TaxID=298653 {ECO:0000313|EMBL:ABW09969.1, ECO:0000313|Proteomes:UP000001313};
RN   [1] {ECO:0000313|Proteomes:UP000001313}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EAN1pec {ECO:0000313|Proteomes:UP000001313};
RX   PubMed=17151343; DOI=10.1101/gr.5798407;
RA   Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N.,
RA   Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N.,
RA   Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N.,
RA   Francino M.P., Goltsman E., Huang Y., Kopp O.R., Labarre L.,
RA   Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E.,
RA   Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z.,
RA   Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D.,
RA   Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R.;
RT   "Genome characteristics of facultatively symbiotic Frankia sp. strains
RT   reflect host range and host plant biogeography.";
RL   Genome Res. 17:7-15(2007).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000820; ABW09969.1; -; Genomic_DNA.
DR   RefSeq; WP_020458163.1; NC_009921.1.
DR   STRING; 298653.Franean1_0508; -.
DR   EnsemblBacteria; ABW09969; ABW09969; Franean1_0508.
DR   KEGG; fre:Franean1_0508; -.
DR   eggNOG; ENOG410ZZ42; LUCA.
DR   HOGENOM; HOG000013243; -.
DR   OMA; SAHTITR; -.
DR   OrthoDB; 1755994at2; -.
DR   BioCyc; FSP298653:G1G9X-502-MONOMER; -.
DR   Proteomes; UP000001313; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:InterPro.
DR   GO; GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 3.30.450.40; -; 2.
DR   InterPro; IPR003018; GAF.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR001610; PAC.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013767; PAS_fold.
DR   InterPro; IPR011712; Sig_transdc_His_kin_sub3_dim/P.
DR   Pfam; PF01590; GAF; 1.
DR   Pfam; PF13185; GAF_2; 1.
DR   Pfam; PF07730; HisKA_3; 1.
DR   Pfam; PF00989; PAS; 1.
DR   SMART; SM00065; GAF; 2.
DR   SMART; SM00086; PAC; 1.
DR   SMART; SM00091; PAS; 1.
DR   SUPFAM; SSF55785; SSF55785; 1.
DR   TIGRFAMs; TIGR00229; sensory_box; 1.
DR   PROSITE; PS50113; PAC; 1.
DR   PROSITE; PS50112; PAS; 1.
PE   4: Predicted;
DR   PRODOM; A8KX66.
DR   SWISS-2DPAGE; A8KX66.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001313};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001313}.
FT   DOMAIN       29     92       PAS. {ECO:0000259|PROSITE:PS50112}.
FT   DOMAIN       96    148       PAC. {ECO:0000259|PROSITE:PS50113}.
SQ   SEQUENCE   673 AA;  72012 MW;  8EA08851CF1D2F16 CRC64;
     MTSVSGDARH VGAGSWAGEH VGDVEAAVLL DTLSEVVFRT DAEGRWTYLN RAWTRLTGFE
     IGPSLGARFL DYVHPDELEY TVALFMGVVA GGADHCHHET RYRTRDGSYR RVQIRANVIR
     DGDGEVIGNT GTIVDVTDSR RGSETIGEHV ALLELVSADA PGGELPVGVV VYDADLRLRR
     GSPVIDRLAG APQRIGDPLA RLVERLAPAD PRQRALGGEW GLIAVARRTN HAQVSDLDLA
     DPSRSLRVSV IPYLRDGEEM LALVLADITD LRRAEHRQAA LARLGHRAIS SSDTAALVSE
     AAGMVTSTLD VAGCKLIHLD PRGGDAAGTS PLLDRVLTDD QPVMIDSPVS DLARCLAGSP
     PGSDVATVLA TRVGGAGLLF GVLAAHSTTP RHFTDDEIQF VQAVADILTA ALERDRTDHE
     LRRLYRRAEH SKAWLAASAH TITRVIAATE PRDALDLIAA TARTMAGTDI GVVAVPDEHG
     NLVITTADVA PGLPAAPDSL LGLSLTQGVT PVAEQLTAGG TVVLDSLDLR GSRISPAPNM
     PIATALILPL RITRRSSAVL ILGNHTDTAR LPLHDIELIE AFAHDAALAV ELIQTQHDRA
     RLAVFQDRDR IARDLHDQVI QRLFAIGLHL QSLTRAVGDI AAARLTSAIN ALDHTIDDIR
     HTIFDLHPIQ PGQ
//

If you have problems or comments...

PBIL Back to PBIL home page