(data stored in SCRATCH zone)

SWISSPROT: A8LBA5_FRASN

ID   A8LBA5_FRASN            Unreviewed;       588 AA.
AC   A8LBA5;
DT   04-DEC-2007, integrated into UniProtKB/TrEMBL.
DT   04-DEC-2007, sequence version 1.
DT   08-MAY-2019, entry version 50.
DE   SubName: Full=Diguanylate cyclase {ECO:0000313|EMBL:ABW09566.1};
GN   OrderedLocusNames=Franean1_0099 {ECO:0000313|EMBL:ABW09566.1};
OS   Frankia sp. (strain EAN1pec).
OC   Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.
OX   NCBI_TaxID=298653 {ECO:0000313|EMBL:ABW09566.1, ECO:0000313|Proteomes:UP000001313};
RN   [1] {ECO:0000313|Proteomes:UP000001313}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EAN1pec {ECO:0000313|Proteomes:UP000001313};
RX   PubMed=17151343; DOI=10.1101/gr.5798407;
RA   Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N.,
RA   Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N.,
RA   Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N.,
RA   Francino M.P., Goltsman E., Huang Y., Kopp O.R., Labarre L.,
RA   Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E.,
RA   Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z.,
RA   Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D.,
RA   Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R.;
RT   "Genome characteristics of facultatively symbiotic Frankia sp. strains
RT   reflect host range and host plant biogeography.";
RL   Genome Res. 17:7-15(2007).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000820; ABW09566.1; -; Genomic_DNA.
DR   RefSeq; WP_012157543.1; NC_009921.1.
DR   STRING; 298653.Franean1_0099; -.
DR   EnsemblBacteria; ABW09566; ABW09566; Franean1_0099.
DR   KEGG; fre:Franean1_0099; -.
DR   eggNOG; ENOG4105BZU; Bacteria.
DR   eggNOG; ENOG410XNMH; LUCA.
DR   HOGENOM; HOG000224587; -.
DR   OrthoDB; 1635706at2; -.
DR   BioCyc; FSP298653:G1G9X-97-MONOMER; -.
DR   Proteomes; UP000001313; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   CDD; cd01949; GGDEF; 1.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   Pfam; PF00990; GGDEF; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SUPFAM; SSF55073; SSF55073; 1.
DR   TIGRFAMs; TIGR00254; GGDEF; 1.
DR   PROSITE; PS50887; GGDEF; 1.
PE   4: Predicted;
DR   PRODOM; A8LBA5.
DR   SWISS-2DPAGE; A8LBA5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001313};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001313};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL        1     29       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        30    588       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5002722646.
FT   TRANSMEM     39     60       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     72     90       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    102    123       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    144    164       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    184    204       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    216    239       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    245    262       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    311    330       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    342    358       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      411    569       GGDEF. {ECO:0000259|PROSITE:PS50887}.
SQ   SEQUENCE   588 AA;  62035 MW;  C5936F2CC3A97021 CRC64;
     MGHSRRRDRL FRRAAVGAAV LTGACVVLAQ VLPDSLALSA VRLTVIGFLL LGGTTCVVAG
     LRRHGAERWW RLLMAVMVLA VAVASAAVFR DTAAGRSPVP QLTPASLVYL IPLAMGVAGV
     LLYPTDPVEH DDAEDGGPLH AYRWYAITVL DGMIVVGSVA LLVWATVLER TVGHGEPLGP
     GPLYSIILAA VSLVVFVVLI LVAVFREPRD SRGHALLLAG MCAASISAMW ELAVLIHGLD
     DVPRLTDLPI GIGALLIGLA AISTDPDTGA TTGADAAADV DVDADADAVG VGLAAVPSLG
     RRAASARLRR WHAILPYLPL TAAGAATVLQ IAGDGIGHWE EIWALLALLL LALVRQMMTM
     SDNIRLLGQV EEKQRQLRHQ AFHDPLTGLA NRSLFIDRLE RALHRQPGPA ERFAVLFCDL
     DDFKRVNDVL GHAAGDDLLR ITGARLAGCV RAADTVARLG GDEFAILLVS ANIDDPEAVG
     CRLAAAVRAP VRLASHTFTV AASVGLVTVD PETGTGAPHQ GADPDPDPDT DTEPRADVPD
     TAEQLLHRAD LAMYAAKARR NGEPAVYTPE LVGPGRARAR PARNVPLP
//

If you have problems or comments...

PBIL Back to PBIL home page