(data stored in SCRATCH zone)

SWISSPROT: A8LF99_FRASN

ID   A8LF99_FRASN            Unreviewed;       475 AA.
AC   A8LF99;
DT   04-DEC-2007, integrated into UniProtKB/TrEMBL.
DT   04-DEC-2007, sequence version 1.
DT   08-MAY-2019, entry version 52.
DE   SubName: Full=Diguanylate phosphodiesterase with GAF sensor(S) {ECO:0000313|EMBL:ABW09844.1};
GN   OrderedLocusNames=Franean1_0378 {ECO:0000313|EMBL:ABW09844.1};
OS   Frankia sp. (strain EAN1pec).
OC   Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.
OX   NCBI_TaxID=298653 {ECO:0000313|EMBL:ABW09844.1, ECO:0000313|Proteomes:UP000001313};
RN   [1] {ECO:0000313|Proteomes:UP000001313}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EAN1pec {ECO:0000313|Proteomes:UP000001313};
RX   PubMed=17151343; DOI=10.1101/gr.5798407;
RA   Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N.,
RA   Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N.,
RA   Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N.,
RA   Francino M.P., Goltsman E., Huang Y., Kopp O.R., Labarre L.,
RA   Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E.,
RA   Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z.,
RA   Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D.,
RA   Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R.;
RT   "Genome characteristics of facultatively symbiotic Frankia sp. strains
RT   reflect host range and host plant biogeography.";
RL   Genome Res. 17:7-15(2007).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000820; ABW09844.1; -; Genomic_DNA.
DR   RefSeq; WP_012157820.1; NC_009921.1.
DR   STRING; 298653.Franean1_0378; -.
DR   EnsemblBacteria; ABW09844; ABW09844; Franean1_0378.
DR   KEGG; fre:Franean1_0378; -.
DR   eggNOG; ENOG4105BZU; Bacteria.
DR   eggNOG; ENOG410XNMH; LUCA.
DR   HOGENOM; HOG000219837; -.
DR   OrthoDB; 1635706at2; -.
DR   BioCyc; FSP298653:G1G9X-375-MONOMER; -.
DR   Proteomes; UP000001313; Chromosome.
DR   CDD; cd01948; EAL; 1.
DR   Gene3D; 3.20.20.450; -; 1.
DR   Gene3D; 3.30.450.40; -; 1.
DR   InterPro; IPR001633; EAL_dom.
DR   InterPro; IPR035919; EAL_sf.
DR   InterPro; IPR003018; GAF.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   Pfam; PF00563; EAL; 1.
DR   Pfam; PF13185; GAF_2; 1.
DR   SMART; SM00052; EAL; 1.
DR   SMART; SM00065; GAF; 1.
DR   SUPFAM; SSF141868; SSF141868; 2.
DR   PROSITE; PS50883; EAL; 1.
PE   4: Predicted;
DR   PRODOM; A8LF99.
DR   SWISS-2DPAGE; A8LF99.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001313};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001313}.
FT   DOMAIN      185    464       EAL. {ECO:0000259|PROSITE:PS50883}.
SQ   SEQUENCE   475 AA;  50208 MW;  298985D6465837B9 CRC64;
     MSVFASGAGS QDPRDGRDGR DRRRGRDRRV GGRVRERTDE VARVLDLARR HLGTDVAWLS
     RFTGDEQVID LISGEGELVE RLVGRQVEQE ATYCARVLDG RLPAVIPDAR ADQRTAALAV
     TRELGIGSYV GAPVYLDSGE VYGMLCALST EPDPGLGDRE ARFLGLLADV VADAVSALHR
     GGADDDHIRS VIAQVIARGG PVMVFQPVFD LPTHGLVGAE ALARFPTFPA PSGEPAGDLG
     EETGDQAGGA AGEEADDRTA AGPYFGDLPP DRWFAHAASV GMGIDLELAA IRAAVAELPR
     FPRGLSLAVN ASPATIASGR LGELLAATAT DQLIVEITER DGIHDLPSTL ARLYELREMG
     VRIAVDNVGV AYASLRRLVQ ILPDVVKMNL WLTTDIGADA ARRALVEALV HFSRQIGACL
     VAEGIQRANE LRVLTAAGVD QGQGEFLGPP GPLPLPVHGR CVPASHGPLV SARAS
//

If you have problems or comments...

PBIL Back to PBIL home page