(data stored in ACNUC9543 zone)

SWISSPROT: A8XLM7_CAEBR

ID   A8XLM7_CAEBR            Unreviewed;       722 AA.
AC   A8XLM7;
DT   15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT   16-DEC-2008, sequence version 2.
DT   08-MAY-2019, entry version 80.
DE   SubName: Full=Protein CBG15221 {ECO:0000313|EMBL:CAP33531.2};
GN   ORFNames=CBG15221 {ECO:0000313|EMBL:CAP33531.2,
GN   ECO:0000313|WormBase:CBG15221a}, CBG_15221
GN   {ECO:0000313|EMBL:CAP33531.2};
OS   Caenorhabditis briggsae.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP33531.2, ECO:0000313|Proteomes:UP000008549};
RN   [1] {ECO:0000313|EMBL:CAP33531.2, ECO:0000313|Proteomes:UP000008549}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AF16 {ECO:0000313|EMBL:CAP33531.2,
RC   ECO:0000313|Proteomes:UP000008549};
RX   PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA   Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA   Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A.,
RA   D'Eustachio P., Fitch D.H., Fulton L.A., Fulton R.E.,
RA   Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R.,
RA   Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P.,
RA   Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M.,
RA   Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.,
RA   Waterston R.H.;
RT   "The genome sequence of Caenorhabditis briggsae: a platform for
RT   comparative genomics.";
RL   PLoS Biol. 1:166-192(2003).
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DR   EMBL; HE601055; CAP33531.2; -; Genomic_DNA.
DR   STRING; 6238.CBG15221; -.
DR   EnsemblMetazoa; CBG15221a; CBG15221a; WBGene00035541.
DR   WormBase; CBG15221a; CBP25838; WBGene00035541; -.
DR   eggNOG; KOG0925; Eukaryota.
DR   eggNOG; COG1643; LUCA.
DR   HOGENOM; HOG000175261; -.
DR   InParanoid; A8XLM7; -.
DR   OMA; LCKCITA; -.
DR   OrthoDB; 354219at2759; -.
DR   Proteomes; UP000008549; Chromosome III.
DR   GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0034459; F:ATP-dependent 3'-5' RNA helicase activity; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   CDD; cd00079; HELICc; 1.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR011709; DUF1605.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   Pfam; PF04408; HA2; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
DR   PRODOM; A8XLM7.
DR   SWISS-2DPAGE; A8XLM7.
KW   ATP-binding {ECO:0000256|SAAS:SAAS01176619};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008549};
KW   Hydrolase {ECO:0000256|SAAS:SAAS01176622};
KW   Nucleotide-binding {ECO:0000256|SAAS:SAAS01176608};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008549}.
FT   DOMAIN       87    251       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      283    457       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   COILED      306    326       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   722 AA;  81813 MW;  20D636DA674FE8D7 CRC64;
     MSRYHPGHGQ REHRGSAPTR RGFARPSDAA DEPRTGPLIL EEKTTETTSS AGPEDQQLKV
     FNNPYASLNI QQQRIRLPIF KNRGHILYMC ERYRTLIIVG ETGCGKSTQV PQFLLEFGWA
     DDGRQIAITQ PRRVAVVTLA TRVAEETDTL LGHNIGYTVR FDDVSDEATK VKFMTDGLLL
     REILQDPMLS KYSIIMIDEA HERSCNTDIL LGLLRKIMQV RNDLRIIVSS ATLDAELFRD
     FFEMNETGNP EKDTAAILSV EGRTHPVAVH HTKTPVPNYC QAAVDTVINI HKHEMPGDIL
     VFLTGQDEVE DVCEKLREEA RKLRNCDKLW VVPCYGALPA SEQMKAFDST PHGTRKVVVA
     TNIAEASITI PGICYVIDTG YVKLRAVNAN NGVESLMRVT VSQASAEQRA GRAGRIRPGK
     CYRLYPESEF RKFSEGTIPE IQRCHLAATI LQLKALGVQN VHKFHYLSPP PSWSMIQGLE
     LLYALGAIDE SSQLTDPLGL QMAEFPLPPM HSKCLLKSAE FGCSDEIVTI VAMMQIQDVF
     LTPFRARHQA DIIRKKFSVE EGDHMTMLNV FTKFVENGRS KKWCSDHFVN YRGLMRADNV
     RSQLVRLLKR FEIPKVSCRG LINASENIRQ CLVTGFFSQA AQYHYTGKYM TVKENFPFNV
     YKGSSIMFKK DYPKWVIFTE VMQDSIRDVT VIEPEWLYEL APHYYEFGTE GELAEKRMRG
     GQ
//

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