(data stored in ACNUC16935 zone)

SWISSPROT: A9PDJ4_POPTR

ID   A9PDJ4_POPTR            Unreviewed;       154 AA.
AC   A9PDJ4;
DT   05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT   05-FEB-2008, sequence version 1.
DT   30-AUG-2017, entry version 58.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABK94447.1};
GN   ORFNames=POPTR_0002s06320g {ECO:0000313|EMBL:EEE81426.1};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera
OS   subsp. trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae;
OC   Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:ABK94447.1};
RN   [1] {ECO:0000313|EMBL:EEE81426.1, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D.,
RA   Boerjan W., Brun A., Brunner A., Busov V., Campbell M., Carlson J.,
RA   Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M.,
RA   Couturier J., Covert S., Cronk Q., Cunningham R., Davis J.,
RA   Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B.,
RA   Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K.,
RA   Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L.,
RA   Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D.,
RA   Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M.,
RA   Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C.,
RA   Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S.,
RA   Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C.,
RA   Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G.,
RA   Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K.,
RA   Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H.,
RA   Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E.,
RA   Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T.,
RA   Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
RN   [2] {ECO:0000313|EMBL:ABK94447.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Phloem and cambium {ECO:0000313|EMBL:ABK94447.1};
RX   PubMed=18230180; DOI=10.1186/1471-2164-9-57;
RA   Ralph S.G., Chun H.J., Cooper D., Kirkpatrick R., Kolosova N.,
RA   Gunter L., Tuskan G.A., Douglas C.J., Holt R.A., Jones S.J.,
RA   Marra M.A., Bohlmann J.;
RT   "Analysis of 4,664 high-quality sequence-finished poplar full-length
RT   cDNA clones and their utility for the discovery of genes responding to
RT   insect feeding.";
RL   BMC Genomics 9:57-57(2008).
RN   [3] {ECO:0000313|EMBL:EEE81426.1}
RP   NUCLEOTIDE SEQUENCE.
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Shu S., Lucas S., Jenkins J., Grimwood J., Muchero w., Hayes R.,
RA   Goodstein D., Rokhsar D., Schmutz J., Tuskan G.;
RL   Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; EF146368; ABK94447.1; -; mRNA.
DR   EMBL; CM000338; EEE81426.1; -; Genomic_DNA.
DR   RefSeq; XP_002302153.1; XM_002302117.2.
DR   UniGene; Pth.4340; -.
DR   STRING; 3694.POPTR_0002s06320.1; -.
DR   EnsemblPlants; POPTR_0002s06320.1; POPTR_0002s06320.1; POPTR_0002s06320.
DR   GeneID; 7468753; -.
DR   Gramene; POPTR_0002s06320.1; POPTR_0002s06320.1; POPTR_0002s06320.
DR   KEGG; pop:POPTR_0002s06320g; -.
DR   eggNOG; KOG0001; Eukaryota.
DR   eggNOG; COG5272; LUCA.
DR   HOGENOM; HOG000233942; -.
DR   KO; K12158; -.
DR   OMA; ETQIVTC; -.
DR   OrthoDB; EOG09360QBF; -.
DR   Proteomes; UP000006729; Linkage group LGII.
DR   InterPro; IPR019956; Ubiquitin.
DR   InterPro; IPR029071; Ubiquitin-rel_dom.
DR   InterPro; IPR019954; Ubiquitin_CS.
DR   InterPro; IPR000626; Ubiquitin_dom.
DR   Pfam; PF00240; ubiquitin; 2.
DR   PRINTS; PR00348; UBIQUITIN.
DR   SMART; SM00213; UBQ; 2.
DR   SUPFAM; SSF54236; SSF54236; 2.
DR   PROSITE; PS00299; UBIQUITIN_1; 2.
DR   PROSITE; PS50053; UBIQUITIN_2; 2.
PE   2: Evidence at transcript level;
DR   PRODOM; A9PDJ4.
DR   SWISS-2DPAGE; A9PDJ4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006729};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT   DOMAIN        1     76       Ubiquitin-like. {ECO:0000259|PROSITE:
FT                                PS50053}.
FT   DOMAIN       77    152       Ubiquitin-like. {ECO:0000259|PROSITE:
FT                                PS50053}.
SQ   SEQUENCE   154 AA;  17210 MW;  DF7CD3DDD3C05A3A CRC64;
     MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN
     IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPNDTID RIKERVEEKE GIPPVQQRLI
     YAGKQLGDDK TARDYNIEGG SVLHLVLALR GGCL
//

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